| Protein: | gi|113537326, gi... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 373 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|113537326, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
165.0 | [0..5] | [355..3] |
|
|
156.0 | [0..5] | [355..3] |
|
|
147.0 | [0..14] | [364..240] |
|
|
144.0 | [0..2] | [345..14] |
|
|
143.0 | [0..3] | [349..391] |
|
|
142.0 | [0..6] | [339..322] |
|
|
141.0 | [0..15] | [363..251] |
|
|
140.0 | [0..1] | [234..7] |
|
Region A: Residues: [1-78] |
1 11 21 31 41 51
| | | | | |
1 MSTLVDALCA PCSDTALIYD TFNASAAASF LFDNAAAFCD ADILGATATG EKEATSSAAA 60
61 AAAEAAPPRK KRRRRAKS
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [79-185] |
1 11 21 31 41 51
| | | | | |
1 CKSREETETQ RMTHIAVERN RRRQMNEYLA ILRSLMPEPY VQRGDQASIV GGAIEFVKEL 60
61 EQQLQSLEAQ KRTLLPHHKA RCDDATPMHN ASGSNVGAGG CMEPTTT
|
| Detection Method: | |
| Confidence: | 15.39794 |
| Match: | 1nkpA |
| Description: | Myc prot-oncogene protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [186-266] |
1 11 21 31 41 51
| | | | | |
1 TSNCSSSVTE DAPSADAPPF AQFFAYPQYV WCHSPRDSTT TTTAASASAS ASASSSSPAT 60
61 VAAALQSEHR SGLADIEVSL V
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.688 | a.101.1 | Uteroglobin-like |
| View | Download | 0.587 | d.51.1 | Eukaryotic type KH-domain (KH-domain type I) |
| View | Download | 0.571 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.571 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.552 | a.51.1 | Cytochrome c oxidase subunit h |
| View | Download | 0.532 | a.118.1 | ARM repeat |
| View | Download | 0.532 | a.118.1 | ARM repeat |
| View | Download | 0.513 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.482 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.450 | a.51.1 | Cytochrome c oxidase subunit h |
|
Region A: Residues: [267-373] |
1 11 21 31 41 51
| | | | | |
1 ETHASVRVMS PRRPGQLLKM IAGLQALRLT VLHLNVTTLD SLVLYTLSVK VEEGCSLTTV 60
61 DDIAAAVHHV LCIVDAEAAA SEHLLAAGQL ATTATAVAKR ELATYMY
|
| Detection Method: | |
| Confidence: | 1.24 |
| Match: | 2nyiA |
| Description: | No description for 2nyiA was found. |
