| Protein: | gi|115447269, gi... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 458 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|115447269, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
393.0 | [0..7] | [458..5] |
|
|
393.0 | [0..7] | [458..5] |
|
|
393.0 | [0..1] | [458..1] |
|
|
389.0 | [0..5] | [458..5] |
|
|
273.0 | [0..2] | [350..27] |
|
|
273.0 | [0..2] | [350..31] |
|
Region A: Residues: [1-348] |
1 11 21 31 41 51
| | | | | |
1 MKGKRGRVRL NVGGRVFETM ASTLASAGRD TMLGAMIDAS WNHGGGGDGD GEGGADEYFI 60
61 DRDPECFAVL LDLLRTGGLH VPPHVADGVL CREALYYGLL DRVRAARWGP FDGDRLRLAA 120
121 SVAGSAAGDG TAVRAAPDGG CCVAHGGAVR VYNWVMEERR AVHLDHAPVN DAAYLDEATL 180
181 LVAARERPGT GRRDGGVAAF SALTGDLRHR FRVAHDRHVR SYTPGALAFD SRCKVFASCK 240
241 GRFNEYGIGV WDCTTGEQAD FFYEPPGCAL GDADKLQWLD GTSTLMAATM FPRTDSSFIS 300
301 LLDFRDKKNV AWSWSDVGTP ASLEDKHVLH AIAMEDGRSL CVINQYDD
|
| Detection Method: |  |
| Confidence: | 65.69897 |
| Match: | 2a79B |
| Description: | Mammalian Shaker Kv1.2 potassium channel- beta subunit complex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [349-458] |
1 11 21 31 41 51
| | | | | |
1 LGFLDVRSSG GAGGVRWRSR SKLAARKKKA APRGEETCYP KLAAHGGQLF ASTNDTISVF 60
61 SGPDHVLTST LRGSDAGAIC DFSIGGDRLF ALHNEENVVD VWETSPPPII
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
