| Protein: | gi|34498661, gi|... |
| Organism: | Chromobacterium violaceum ATCC 12472 |
| Length: | 110 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|34498661, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
125.0 | [0..38] | [110..30] |
|
Region A: Residues: [1-110] |
1 11 21 31 41 51
| | | | | |
1 MPPAGCSSCV MCSCRSGNSR TSVAISLDLR AFYSTARFEE FNKMATGTVK WFNDSKGFGF 60
61 ITPDEGGDDV FAHFSQINAK GFRSLAENQR VSFDIVEGPK GKQASNIQPI
|
| Detection Method: |  |
| Confidence: | 27.045757 |
| Match: | 1mjcA |
| Description: | CRYSTAL STRUCTURE OF CSPA, THE MAJOR COLD SHOCK PROTEIN OF ESCHERICHIA COLI |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| nucleic acid binding | 2.67999218416128 | bayes_pls_golite062009 |
| DNA binding | 2.0554473444871 | bayes_pls_golite062009 |
| binding | 1.49502978097244 | bayes_pls_golite062009 |
| transcription regulator activity | 0.537716356194117 | bayes_pls_golite062009 |
| structural constituent of ribosome | 0.0989196136046104 | bayes_pls_golite062009 |
