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View Structure Prediction Details

Protein: gi|31432456, gi|...
Organism: Oryza sativa Japonica Group
Length: 639 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|31432456, gi|....

Description E-value Query
Range
Subject
Range
gi|7267971, gi|7... - pir||T06628 hypothetical protein T20K18.50 - Arabidopsis thaliana, gi|7267971|emb|CAB78312.1| putat...
891.0 [0..1] [639..1]
gi|92869815 - gi|92869815|gb|ABE79305.1| Proteinase inhibitor I4, serpin [Medicago truncatula]
832.0 [0..19] [635..16]
gi|125601205, gi... - gi|34913308|ref|NP_918001.1| unknown protein [Oryza sativa (japonica cultivar-group)], gi|22296387|d...
734.0 [0..19] [636..32]

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Predicted Domain #1
Region A:
Residues: [1-148]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLGRAGALSA ARWRGGAGTG TGIGIDLRAA LRSGGNLLFA LFVAAVLAFT LLAAVHSPDD  60
   61 PLLHPSSHQL TAFLTSATSN STFLADDSVL RTGEDFAAAI GANSSDAAAA AEATVVAEAV 120
  121 PFIKLEDVAT KEESSGAERA VTVDTDAS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [149-366]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SDAGAAAEEN PIVEAVSCDT EAPVDCTGDK DLFNLLMRTA IEKFSDLHFY RFGRPVAVPG  60
   61 SPMECDLAWR FRPAEDTNGR TTYYKDYRRF TLTRDVNTCN LVVGNVGEYH SGTGAKRSGR 120
  121 RKGKKGKKGK REAPVTDFVP AKTQMRLDEN AANADTTAAS EPELVVGEAV NDNLPVVESE 180
  181 SEFSRGKYLI YMGGGERCKS MNHYVWGFLC ALGEAQYL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [367-510]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NRTLVMDLNV CLNSRYTSSG KDEERDFRLY FDFEHLKQSA SVIDQSQFWT DWGKWHKKDR  60
   61 LKNHYTEDIK VTPMQLRDVK DTLIMRKFGN VEPDNFWSRV CEGETEAVIK RPWYLLWKSR 120
  121 RLMEIVSAIS SRMDWDFDSV HVVR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [511-639]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GEKAQNKQLW PNLDRDTSPD SLLTTLNDKV GAGRHLYIAT NEPDKSFFDP MKGKYRTHFL  60
   61 DDFKDLWDEN SEWYTETKEL SNGNAVEFDG YMRVAVDTEV FLRGKRKLET FSDLTRDCKN 120
  121 GVNTCPASS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle