| Protein: | gi|31432456, gi|... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 639 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|31432456, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
891.0 | [0..1] | [639..1] |
|
|
832.0 | [0..19] | [635..16] |
|
|
734.0 | [0..19] | [636..32] |
|
Region A: Residues: [1-148] |
1 11 21 31 41 51
| | | | | |
1 MLGRAGALSA ARWRGGAGTG TGIGIDLRAA LRSGGNLLFA LFVAAVLAFT LLAAVHSPDD 60
61 PLLHPSSHQL TAFLTSATSN STFLADDSVL RTGEDFAAAI GANSSDAAAA AEATVVAEAV 120
121 PFIKLEDVAT KEESSGAERA VTVDTDAS
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.462 | d.51.1 | Eukaryotic type KH-domain (KH-domain type I) |
| View | Download | 0.388 | d.197.1 | Protein-L-isoaspartyl O-methyltransferase, C-terminal domain |
| View | Download | 0.388 | d.197.1 | Protein-L-isoaspartyl O-methyltransferase, C-terminal domain |
| View | Download | 0.379 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.326 | a.186.1 | Description not found. |
| View | Download | 0.319 | f.14.1 | Voltage-gated potassium channels |
| View | Download | 0.319 | f.14.1 | Voltage-gated potassium channels |
| View | Download | 0.317 | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.306 | a.28.1 | ACP-like |
| View | Download | 0.304 | a.118.1 | ARM repeat |
|
Region A: Residues: [149-366] |
1 11 21 31 41 51
| | | | | |
1 SDAGAAAEEN PIVEAVSCDT EAPVDCTGDK DLFNLLMRTA IEKFSDLHFY RFGRPVAVPG 60
61 SPMECDLAWR FRPAEDTNGR TTYYKDYRRF TLTRDVNTCN LVVGNVGEYH SGTGAKRSGR 120
121 RKGKKGKKGK REAPVTDFVP AKTQMRLDEN AANADTTAAS EPELVVGEAV NDNLPVVESE 180
181 SEFSRGKYLI YMGGGERCKS MNHYVWGFLC ALGEAQYL
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [367-510] |
1 11 21 31 41 51
| | | | | |
1 NRTLVMDLNV CLNSRYTSSG KDEERDFRLY FDFEHLKQSA SVIDQSQFWT DWGKWHKKDR 60
61 LKNHYTEDIK VTPMQLRDVK DTLIMRKFGN VEPDNFWSRV CEGETEAVIK RPWYLLWKSR 120
121 RLMEIVSAIS SRMDWDFDSV HVVR
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.623 | d.20.1 | UBC-like |
| View | Download | 0.515 | a.118.1 | ARM repeat |
| View | Download | 0.473 | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.460 | a.118.1 | ARM repeat |
| View | Download | 0.453 | a.25.1 | Ferritin-like |
| View | Download | 0.375 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.317 | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.293 | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.280 | d.8.1 | Urease, gamma-subunit |
| View | Download | 0.278 | a.118.8 | TPR-like |
|
Region A: Residues: [511-639] |
1 11 21 31 41 51
| | | | | |
1 GEKAQNKQLW PNLDRDTSPD SLLTTLNDKV GAGRHLYIAT NEPDKSFFDP MKGKYRTHFL 60
61 DDFKDLWDEN SEWYTETKEL SNGNAVEFDG YMRVAVDTEV FLRGKRKLET FSDLTRDCKN 120
121 GVNTCPASS
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.768 | c.25.1 | Ferredoxin reductase-like, C-terminal NADP-linked domain |
| View | Download | 0.768 | c.25.1 | Ferredoxin reductase-like, C-terminal NADP-linked domain |
| View | Download | 0.692 | c.25.1 | Ferredoxin reductase-like, C-terminal NADP-linked domain |
| View | Download | 0.692 | c.25.1 | Ferredoxin reductase-like, C-terminal NADP-linked domain |
| View | Download | 0.559 | c.25.1 | Ferredoxin reductase-like, C-terminal NADP-linked domain |
| View | Download | 0.559 | c.25.1 | Ferredoxin reductase-like, C-terminal NADP-linked domain |
| View | Download | 0.529 | d.68.3 | SirA-like |
| View | Download | 0.529 | d.68.3 | SirA-like |
| View | Download | 0.522 | c.59.1 | MurD-like peptide ligases, peptide-binding domain |
| View | Download | 0.486 | c.25.1 | Ferredoxin reductase-like, C-terminal NADP-linked domain |
