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View Structure Prediction Details

Protein: gi|37533964, gi|...
Organism: Oryza sativa Japonica Group
Length: 414 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|37533964, gi|....

Description E-value Query
Range
Subject
Range
gi|78708529, gi|... - gi|78708529|gb|ABB47504.1| Initiation factor 2 subunit family [Oryza sativa (japonica cultivar-group...
391.0 [0..1] [414..1]

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Predicted Domain #1
Region A:
Residues: [1-414]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPDVQPLVSE FVLKLKRRKV EGSHAVARQT AELLRSVVSQ HRMGSTNQAA ALADAVRGVG  60
   61 EQLIAANPIE LAVGNIVRRV LHIIKEEDIS STAVGIEGLS VTAESDDEYD SGNDDHPTLS 120
  121 AAVLAAHARN ALRAPSLQTL LEDIPVSTAL SRSASSAGDS DGKSGDKSSK SRKLKHDVIA 180
  181 AIGDLIDEID TCYDQISEQA VEHIHQNEVI LTLGRSRTVK EFLYAAKEKK RSFRVFVAEG 240
  241 APRYKGHVLA KELVEKGVQT TVITDSAVFA MISRVNMVIV GAHAIMANGG VIAPVGMNMV 300
  301 ALAAQRHAVP FVVVAGSHKL CPLYPHNPEV LLNELKSPSD LLDFGEFSSC MNFSTQDGTP 360
  361 LLNVVNPTFD YVPPKLVSLF ITDTGGHSPS YMYRLIAEYY SADDLVVRRK STSS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 90.0
Match: 1t9kA
Description: X-ray crystal structure of aIF-2B alpha subunit-related translation initiation factor [Thermotoga maritima]
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.787268490517916 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle