| Protein: | gi|16924038 |
| Organism: | Oryza sativa |
| Length: | 737 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|16924038.
| Description | E-value | Query Range |
Subject Range |
|
|
501.0 | [0..1] | [689..243] |
|
Region A: Residues: [1-142] |
1 11 21 31 41 51
| | | | | |
1 MGDTDETVAC EINHTQSQDT KTGVSTTGVV DASKDKEEQQ QSKDEEKADE ESRKRKPMAL 60
61 RSDVWESFSK VKLANGDERA KCKWCTKLFH CGSRTNGTSS LKAHLKICKK NPNKPVVDNQ 120
121 GTLQLTPCDG NSTLGTVTTW KF
|
| Detection Method: |  |
| Confidence: | 3.69897 |
| Match: | 2ct5A |
| Description: | Solution Structure of the zinc finger BED domain of the zinc finger BED domain containing protein 1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.414217765611205 | bayes_pls_golite062009 |
|
Region A: Residues: [143-737] |
1 11 21 31 41 51
| | | | | |
1 DPDKLRRCFA EMIIEDEQPF VLSERSGLRK FMTLACPRFV LPSRRTITRA CVKVYEDEKE 60
61 KLKKFFKDNC VRVCLTTDTW TAKNSQNFMC VTAHFIDNEW NLQKKIIGFF LVKGHRGEDI 120
121 GKSLENCLAE WGIDKVFTIT VDNASANNNA IKYMRRVLNE SKGCVAEGEY IHMRCAAHII 180
181 NLIVGDGLKE IGTSIQRVRA AVKFIRCGTS RLVKFKKCAE LAKVQSKAFL NLDICTRWNS 240
241 TYLMLNAAEK YQKAFERYSD EDPYYKLELE GENGPGVPTR ADWEKARKMA DFLEHFYDLT 300
301 LRVSVQSRTT SHTYFHEIAD VLLLLREWSH SEDKLSKEMG TRMLMKYYKY WGEKYGERQG 360
361 DREKRGEKDK GDQLLNFTVF FCVAIDPRYK LSNCIRMGIK VMFGDTVGEK VWETVNTYFR 420
421 ALFEEYKEMY TPKDKAPQPT ESESTAETSK RVSCRWMSVI TQQLNSEGGS GTIKSEVDKY 480
481 LSEDNEPDTP KFDILKWWKA NSTRFPILSH LACDLLAIPI TSVASESAFS AGGRTLDDFR 540
541 TSLTPRMVER LVCANDWLRG GNYVSVEEDS EQMALLEEEL GDLSISKEDT PAATQ
|
| Detection Method: | |
| Confidence: | 41.154902 |
| Match: | 2bw3A |
| Description: | Three-dimensional structure of the Hermes DNA transposase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.722279828632226 | bayes_pls_golite062009 |
| hydrolase activity | 0.29272620969648 | bayes_pls_golite062009 |
| hydrolase activity, acting on ester bonds | 0.24934115119652 | bayes_pls_golite062009 |
| nuclease activity | 0.239989310123501 | bayes_pls_golite062009 |
