| Protein: | gi|34907808, gi|... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 409 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|34907808, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
251.0 | [0..1] | [350..329] |
|
Region A: Residues: [1-352] |
1 11 21 31 41 51
| | | | | |
1 MAAAAADFAA SKRAMAYALC KHLSLDPNTI SSTSIEESDI ATLFSHIVKS SEDEVLKWVE 60
61 FSSNFVGKCG EQHALLGNLN QDLSQKSVLL GNGFKPSVAD IVVFATIQVF VSHLGENELQ 120
121 KYPHVLRWMD YIQNIVDFGT TVQKVNLTKS VFDPPSHPKK ADKGDTDPSS KKVVSGQKNV 180
181 GKSDANVDSK KAAPENKAPE NKANPTPAKN NKPSGDKKKA QEKSAGKPNE GVADKAPQKT 240
241 AEKDSECNVS ILNIQVGLIR KAWKHPSADS LLVEEIDLGD GNVHQVVSGL AKFFSPEELV 300
301 NRHVVLITNV KPGKLRDVMS AGLVLCASNQ DHTVVEPLIP PEGAKPGERI SF
|
| Detection Method: |  |
| Confidence: | 37.0 |
| Match: | 1rqgA |
| Description: | Methionyl-tRNA synthetase from Pyrococcus abyssi |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ligase activity, forming carbon-oxygen bonds | 7.22739538544605 | bayes_pls_golite062009 |
| ligase activity, forming aminoacyl-tRNA and related compounds | 7.22739538544605 | bayes_pls_golite062009 |
| aminoacyl-tRNA ligase activity | 7.21678612388154 | bayes_pls_golite062009 |
| ligase activity | 5.98606099120849 | bayes_pls_golite062009 |
| isoleucine-tRNA ligase activity | 3.76808520367507 | bayes_pls_golite062009 |
| catalytic activity | 1.41356903593784 | bayes_pls_golite062009 |
| arginine-tRNA ligase activity | 1.15514226827836 | bayes_pls_golite062009 |
| binding | 1.12496911405027 | bayes_pls_golite062009 |
| protein binding | 0.341429946042706 | bayes_pls_golite062009 |
|
Region A: Residues: [353-409] |
1 11 21 31 41 51
| | | | | |
1 AGFDGKPEDV LNPKKKQLDK ITPDLHTDGN GIATYRGVPF TTSAGPCRSS VPNASIK
|
| Detection Method: | |
| Confidence: | 45.69897 |
| Match: | 1fl0A |
| Description: | EMAP II |
Matching Structure (courtesy of the PDB): |
|
