| Protein: | gi|34914604, gi|... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 541 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|34914604, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
622.0 | [0..1] | [541..1] |
|
|
542.0 | [0..3] | [514..13] |
|
|
538.0 | [0..3] | [515..13] |
|
|
527.0 | [0..3] | [513..11] |
|
|
524.0 | [0..1] | [449..1] |
|
Region A: Residues: [1-77] |
1 11 21 31 41 51
| | | | | |
1 MSIVPKETIE VIGQSVGIAN LPADVSAALA PDVEYRLREI MQEAIKCMRH AKRTVLTADD 60
61 VDSALSLRNV EPVYGFA
|
| Detection Method: |  |
| Confidence: | 21.39794 |
| Match: | 1p3pB |
| Description: | Crystallographic Studies of Nucleosome Core Particles containing Histone 'Sin' Mutants |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [78-417] |
1 11 21 31 41 51
| | | | | |
1 SGDPLRFKRA VGHKDLFYID DREVDFKEII EAPLPKAPLD TAVVAHWLAI EGVQPAIPEN 60
61 PPVDAIVAPT ENKRTEHGKD DGLPVDIKLP VKHVLSRELQ MYFDKIAELT MSRSETSVFR 120
121 EALVSLSRDS GLHPLVPYFS YFIADEVTRS LGDLPVLFAL MRVVQSLLHN PHIHIEPYLH 180
181 QLMPSIITCM VAKRLGHRLS DNHWELRDFS ANLVGSVCRR FGHAYHNIQT RVTRTLVQGF 240
241 LDPQKSLTQH YGAIQGISAL GPSAIRLLLL PNLETYMQLL EPELQLDKQK NEMKRKEAWR 300
301 VYGALLCAAG KCLYDRLKLF PNLLSPSTRP LLRSNKRVVT
|
| Detection Method: | |
| Confidence: | 1.01 |
| Match: | 2ie3A |
| Description: | No description for 2ie3A was found. |
|
Region A: Residues: [418-541] |
1 11 21 31 41 51
| | | | | |
1 NNPNKRKSST DLSTSQPPLK KMTTDGAMNS MTSAPMPGTM DGFSTQLPNP SMTQTSSSGQ 60
61 LVESTASGVI RRDQGSNHTQ RVSTVLRLAW KEDQNAGHLL SSLYEVFGEA IFSFVQPPEI 120
121 SFFL
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.521 | d.134.1 | Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 |
| View | Download | 0.299 | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.248 | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.245 | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.220 | a.79.1 | Antitermination factor NusB |
| View | Download | 0.220 | a.79.1 | Antitermination factor NusB |
| View | Download | 0.200 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
