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Protein Overview: gi|34914604, gi|...

General Information:
Name(s) found: gi|34914604 [NCBI NR]
gi|222618539 [NCBI NR]
gi|215768003 [NCBI NR]
gi|20804496 [NCBI NR]
gi|115436920 [NCBI NR]
gi|113532699 [NCBI NR]
Description(s) found:
Found 9 descriptions.
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  • gi|34914604|ref|NP_918649.1| putative TATA binding protein-associated factor [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|222618539|gb|EEE54671.1| hypothetical protein OsJ_01969 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|215768003|dbj|BAH00232.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
  • gi|20804496|dbj|BAB92191.1| putative TAF6 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115436920|ref|NP_001043168.1| Os01g0510800 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113532699|dbj|BAF05082.1| Os01g0510800 [Oryza sativa Japonica Group] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 541 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIVPKETIE VIGQSVGIAN LPADVSAALA PDVEYRLREI MQEAIKCMRH AKRTVLTADD  60
   61 VDSALSLRNV EPVYGFASGD PLRFKRAVGH KDLFYIDDRE VDFKEIIEAP LPKAPLDTAV 120
  121 VAHWLAIEGV QPAIPENPPV DAIVAPTENK RTEHGKDDGL PVDIKLPVKH VLSRELQMYF 180
  181 DKIAELTMSR SETSVFREAL VSLSRDSGLH PLVPYFSYFI ADEVTRSLGD LPVLFALMRV 240
  241 VQSLLHNPHI HIEPYLHQLM PSIITCMVAK RLGHRLSDNH WELRDFSANL VGSVCRRFGH 300
  301 AYHNIQTRVT RTLVQGFLDP QKSLTQHYGA IQGISALGPS AIRLLLLPNL ETYMQLLEPE 360
  361 LQLDKQKNEM KRKEAWRVYG ALLCAAGKCL YDRLKLFPNL LSPSTRPLLR SNKRVVTNNP 420
  421 NKRKSSTDLS TSQPPLKKMT TDGAMNSMTS APMPGTMDGF STQLPNPSMT QTSSSGQLVE 480
  481 STASGVIRRD QGSNHTQRVS TVLRLAWKED QNAGHLLSSL YEVFGEAIFS FVQPPEISFF 540
  541 L

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..77] PSI-BLAST 21.39794 Crystallographic Studies of Nucleosome Core Particles containing Histone 'Sin' Mutants
    2 View Details [78..417] FFAS03 1.01 No description for 2ie3A was found.
    3 View Details [418..541] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.89

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle