| Protein: | gi|50938775, gi|... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 472 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|50938775, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
243.0 | [0..2] | [466..95] |
|
Region A: Residues: [1-192] |
1 11 21 31 41 51
| | | | | |
1 MEADSGKLFV GGISWETDED RLREYFSRFG EVTEAVIMRD RNTGRARGFG FVVFTDAGVA 60
61 ERVTMDKHMI DGRMVEAKKA VPRDDQSITS KNNGSSIGSP GPGRTRKIFV GGLASNVTEV 120
121 EFRRYFEQFG VITDVVVMYD HNTQRPRGFG FITYDSEDAV DKALHKNFHE LNGKMVEVKR 180
181 AVPKEQSPGP AA
|
| Detection Method: |  |
| Confidence: | 55.221849 |
| Match: | 1po6A |
| Description: | Crystal Structure of UP1 Complexed With d(TAGG(6MI)TTAGGG): A Human Telomeric Repeat Containing 6-methyl-8-(2-deoxy-beta-ribofuranosyl)isoxanthopteridine (6MI) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.950788308762215 | bayes_pls_golite062009 |
| nucleic acid binding | 0.29562225149076 | bayes_pls_golite062009 |
|
Region A: Residues: [193-269] |
1 11 21 31 41 51
| | | | | |
1 RSPAGGQNYA MSRVHSFLNG FNQGYNPNPI GGYGMRVDGR YGLLTGARNG FSSFGPGYGM 60
61 GMNSESGMNA NFGANSS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [270-472] |
1 11 21 31 41 51
| | | | | |
1 FVNNSNGRQI GSFYNGSSNR LGSPIGYVGL NDDSGSLLSS MSRNVWGNEN LNYPNNPTNM 60
61 SSFAPSGTGG QMGITSDGIN WGGPTPGHGM GNISSLGLAN LGRGAGDSFG LPSGSYGRSN 120
121 ATGTIGEPFS APPNAYEVNN ADTYGSSSIY GDSTWRFTSS EIDMPPFGND LGNVDPDIKS 180
181 NIPASYMGNY TVNNNQTSRG ITS
|
| Detection Method: | |
| Confidence: | 7.522879 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
