| Protein: | gi|34899808, gi|... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 615 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|34899808, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
641.0 | [0..1] | [581..1] |
|
|
536.0 | [0..18] | [605..12] |
|
|
494.0 | [0..11] | [615..4] |
|
|
308.0 | [0..303] | [615..41] |
|
|
301.0 | [0..303] | [615..15] |
|
|
298.0 | [0..303] | [615..41] |
|
|
290.0 | [0..303] | [615..41] |
|
Region A: Residues: [1-132] |
1 11 21 31 41 51
| | | | | |
1 MLPRSHSHPA ARRRSGLGAQ LCAVVAALLL LVSLAVLHSR LSSSSSSPFP LSSSGDGVSN 60
61 SSLVEDEDDG AAVLDPTVTI TATTTTTTTT TNAAADSTTD ASSVSNPEDD PIDELDVLDE 120
121 DTASGLGAAD EV
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [133-266] |
1 11 21 31 41 51
| | | | | |
1 PASASASSLV WDHAVGVARL PFRLPAAGDP LPAGLPHLEP AHRIAAAAFG SDDEPVDLEL 60
61 RVEISSIAGV EDALLLKPAS SAPETPLRAG WARWLEGKAD YLRRDRMLRS NLEFLNPRNH 120
121 PLLQDPDSPG LTSL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [267-338] |
1 11 21 31 41 51
| | | | | |
1 TRGDRMVHRM LLAEIEKAAS KNFERRSLQS SDIKQGMGVT EKVQQRRWGY YPGIDPHLGF 60
61 NEFMEKFFEH GK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.890 | a.4.1 | Homeodomain-like |
|
Region A: Residues: [339-473] |
1 11 21 31 41 51
| | | | | |
1 CSVKVFMVWN SPQWAYGVRH QRGLESLLRQ HPEACVVMLS ETLELEFFQE FVKEGYKVAV 60
61 ALPNLDELLE GTLTHDFVSV WNEWRKTKYY PLHYSELVRL AALYKYGGIY LDSDVVVLKP 120
121 LNALRNSIGV VKQVS
|
| Detection Method: | |
| Confidence: | 21.552842 |
| Match: | PF04488.6 |
| Description: | No description for PF04488.6 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.853 | N/A | N/A | c.1.2 | Ribulose-phoshate binding barrel |
|
Region A: Residues: [474-615] |
1 11 21 31 41 51
| | | | | |
1 ENSSFSGAVL AFEKNSPFLA ECLKEFHSTY DDELLQWNGA ELMTRVIRNM SDKADDNSGH 60
61 LDIKFEPSVA FYPISSTDIT RYFSEADSTD ERAQHDALFS RIVNDSTTFH LWNSITSSLV 120
121 PEPNSLVERI LNRYCLHCLD VL
|
| Detection Method: | |
| Confidence: | 33.60206 |
| Match: | PF04572.3 |
| Description: | No description for PF04572.3 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
