| Protein: | SPD1_ORYSJ |
| Organism: | Oryza sativa Japonica Group |
| Length: | 323 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPD1_ORYSJ.
| Description | E-value | Query Range |
Subject Range |
|
|
283.0 | [0..15] | [323..12] |
|
Region A: Residues: [1-323] |
1 11 21 31 41 51
| | | | | |
1 MEAEAAAKRA RESGDAAAAG AGEQAGISAV IPGWFSEISP MWPGEAHSLK VEKVLFQGKS 60
61 DYQNVMVFQS STYGKVLVLD GVIQVTERDE CAYQEMITHL PLCSIKDPKK VLVIGGGDGG 120
121 VLREVSRHSS VEQIDICEID KMVVDVSKQF FPHLAVGFED PRVSLHIGDG VAFLKNAPEG 180
181 TYDAVIVDSS DPIGPAQELF EKPFFQSVAR ALRPGGVVCT QAESIWLHMH IIEDIVANCR 240
241 QVFKGSVNYA WTTVPTYPSG VIGFMLCSTE GPTVDFQHPI FNIEDNEFST KSKGPLKFYN 300
301 SEIHSASFCL PSFAKRVIGS KAN
|
| Detection Method: |  |
| Confidence: | 74.69897 |
| Match: | 1xj5A |
| Description: | X-RAY STRUCTURE OF SPERMIDINE SYNTHASE FROM ARABIDOPSIS THALIANA GENE AT1G23820 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| spermidine synthase activity | 2.31131562815571 | bayes_pls_golite062009 |
| transferase activity | 1.77671966857605 | bayes_pls_golite062009 |
| transcription regulator activity | 1.61435611638306 | bayes_pls_golite062009 |
| DNA binding | 1.53375495589674 | bayes_pls_golite062009 |
| nucleic acid binding | 1.31440474302645 | bayes_pls_golite062009 |
| catalytic activity | 1.25333584501255 | bayes_pls_golite062009 |
| binding | 0.976078016260105 | bayes_pls_golite062009 |
| S-adenosylmethionine-dependent methyltransferase activity | 0.837368219068434 | bayes_pls_golite062009 |
| N-methyltransferase activity | 0.69697643153076 | bayes_pls_golite062009 |
| transferase activity, transferring one-carbon groups | 0.644010137949015 | bayes_pls_golite062009 |
| methyltransferase activity | 0.635463629299812 | bayes_pls_golite062009 |
| protein methyltransferase activity | 0.57386401278889 | bayes_pls_golite062009 |
