| Protein: | HFA2B_ORYSJ |
| Organism: | Oryza sativa Japonica Group |
| Length: | 372 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HFA2B_ORYSJ.
| Description | E-value | Query Range |
Subject Range |
|
|
401.0 | [0..1] | [372..1] |
|
Region A: Residues: [1-131] |
1 11 21 31 41 51
| | | | | |
1 MDDPMLNAVK EEESHGDGGG LEVVAGEDGA AAVAAGVAPR PMEGLHDAGP PPFLTKTYDM 60
61 VDDAGTDAAV SWSATSNSFV VWDPHAFATV LLPRFFKHNN FSSFVRQLNT YGFRKVDPDR 120
121 WEFANENFLR G
|
| Detection Method: |  |
| Confidence: | 32.09691 |
| Match: | 1hksA |
| Description: | SOLUTION STRUCTURE OF THE DNA-BINDING DOMAIN OF DROSOPHILA HEAT SHOCK TRANSCRIPTION FACTOR |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.835523092977445 | bayes_pls_golite062009 |
| transcription regulator activity | 0.4843036104266 | bayes_pls_golite062009 |
| nucleic acid binding | 0.37117756729668 | bayes_pls_golite062009 |
| DNA binding | 0.3118855114645 | bayes_pls_golite062009 |
|
Region A: Residues: [132-372] |
1 11 21 31 41 51
| | | | | |
1 QRHLLKNIKR RKPPSHTASN QQSLGPYLEV GHFGYDAEID RLKRDKQLLM AEVVKLRQEQ 60
61 QNTKANLKAM EDRLQGTEQR QQQMMAFLAR VMKNPEFLKQ LMSQNEMRKE LQDAISKKRR 120
121 RRIDQGPEVD DVGTSSSIEQ ESPALFDPQE SVEFLIDGIP SDLENSAMDA GGLVEPQDFD 180
181 VGASEQQQIG PQGELNDNFW EELLNEGLVG EENDNPVVED DMNVLSEKMG YLNSNGPTAG 240
241 E
|
| Detection Method: | |
| Confidence: | 1.34 |
| Match: | 1jchA |
| Description: | Ribonuclease domain of colicin E3; Colicin E3 translocation domain; Colicin E3 receptor domain |
Matching Structure (courtesy of the PDB): |
|
