| Protein: | gi|7470838 |
| Organism: | Synechocystis sp. |
| Length: | 998 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7470838.
| Description | E-value | Query Range |
Subject Range |
|
|
396.0 | [0..1] | [981..89] |
|
|
363.0 | [0..20] | [974..125] |
|
|
356.0 | [0..20] | [989..108] |
|
|
352.0 | [0..20] | [988..108] |
|
|
344.0 | [0..20] | [979..108] |
|
|
342.0 | [0..497] | [980..647] |
|
|
342.0 | [0..293] | [996..163] |
|
|
341.0 | [0..343] | [973..25] |
|
|
340.0 | [0..400] | [979..214] |
|
|
340.0 | [0..159] | [989..8] |
|
Region A: Residues: [1-174] |
1 11 21 31 41 51
| | | | | |
1 MGKFLDLLQK YWLLPCLLLA GYGGNYFKLH IFFGVDFLFG SIATLLVLVC YSLPWGLVSA 60
61 AIAGSHTLII WRHGYGILII ILEALVVGLM LRRRQTNLVL INSLFWLLIG IPLVYIFYRW 120
121 GLNMTSVTTS LITLKQATNG IFNSLIASFL ITGFGLSKQK FSPSTNPAFF PWKK
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [175-463] |
1 11 21 31 41 51
| | | | | |
1 LSFEQTLFNL LVAFVFFPLF FITVVNGQEA FVQMEKQTVQ ELTALSIPIQ NSVEDWYQSH 60
61 LEGAEVFATE ILPLVAAINQ GNGAQLPALS LMTHTIQTAF TGFSNIYVGD RQGQIIASSP 120
121 EFNEVGESRL GLIQAEKIAG FSIPSQIQVS PLHRTNVNVD PHVAITIPLV ANNSFEGFIN 180
181 ASLNLAKMKD LLYANRVSKE LNITLINGQN QVVASTIANV LPLEIYQPFE GGDPRDLGSS 240
241 NYHWYPDTPA NPTIRWRDSY YYHILPLDKI NDWQLVLGLP ARESIEKLQ
|
| Detection Method: | |
| Confidence: | 3.16 |
| Match: | 2p7jA |
| Description: | No description for 2p7jA was found. |
| Term | Confidence | Notes |
| catalytic activity | 0.0704240813903547 | bayes_pls_golite062009 |
|
Region A: Residues: [464-576] |
1 11 21 31 41 51
| | | | | |
1 AQSVQKLGLL LFLSLVGLVV AIGVSKRVAN PLLTLAKITT DIPTKMQYQG LTPIALRSEV 60
61 SEVITLNENF NEMLITLQNQ FKIIKQAKDN LEMRVAERTH TLIVINKQLA GEI
|
| Detection Method: | |
| Confidence: | 3.03 |
| Match: | 2f95B |
| Description: | M intermediate structure of sensory rhodopsin II/transducer complex in combination with the ground state structure |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [577-843] |
1 11 21 31 41 51
| | | | | |
1 EERQRIEIKL REAKESAELA NRVKSEFLAN ISHEIRTPMN AILGFCDLLL QKDLSLSQTK 60
61 KYLNAIGSSS KILLALIDDI LDISKIEAGK LVIHLEPVDL RVIIREIKQI FDYKAESKSL 120
121 LLTIQIDETL NQAIYFDAVR LRQILFNLVG NALKFTEEGQ VFIYIGVEGI QVRSQGTYIS 180
181 LAIEVTDTGI GIAPEDQAKI FDVFTQSQGQ STRKYGGTGL GLTITRRLTA LLGGEISLSS 240
241 RLGEGSTFIL HFPAVRLVEN SLKSDLT
|
| Detection Method: | |
| Confidence: | 50.0 |
| Match: | 2c2aA |
| Description: | Structure of the entire cytoplasmic portion of a sensor histidine kinase protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [844-998] |
1 11 21 31 41 51
| | | | | |
1 NGDGGNLTDR LGSMSSSSAN TTEKLLPTRV GNMAPDNNSL GNHNGPSQGF PRAVPLIDQA 60
61 QRQQLISLLE QEETNVWNKL RHTLISRQIR NFGDRLSSWG NEYGWEDLHT YGQSIIKALE 120
121 NFDSRRLEQL MGQFPQYRAS LTEVSAGVDG KHASE
|
| Detection Method: | |
| Confidence: | 19.522879 |
| Match: | 1mvoA |
| Description: | PhoP receiver domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| signal transducer activity | 2.07885074402355 | bayes_pls_golite062009 |
| molecular transducer activity | 2.07885074402355 | bayes_pls_golite062009 |
| transcription regulator activity | 1.72455852503325 | bayes_pls_golite062009 |
| two-component response regulator activity | 1.53373140048441 | bayes_pls_golite062009 |
