YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|16329252, gi\|...
Organism:	Synechocystis sp. PCC 6803
Length:	136 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|16329252, gi|....

Description	E-value	Query Range	Subject Range
gi\|22298621, gi\|... - gi\|22298621\|ref\|NP_681868.1\| adenine glycosylase [Thermosynechococcus elongatus BP-1], gi\|22294801\|d...	138.0	[0..1]	[133..230]
gi\|83757907, gi\|... - gi\|83816513\|ref\|YP_446225.1\| A/G-specific adenine glycosylase [Salinibacter ruber DSM 13855], gi\|837...	132.0	[0..2]	[133..215]
gi\|75701836, gi\|... - gi\|75908111\|ref\|YP_322407.1\| Mutator MutT [Anabaena variabilis ATCC 29413], gi\|75701836\|gb\|ABA21512....	132.0	[0..2]	[132..4]
gi\|53762849, gi\|... - gi\|81299484\|ref\|YP_399692.1\| A/G-specific DNA-adenine glycosylase [Synechococcus elongatus PCC 7942]... gi\|56750865, gi\|... - gi\|56750865\|ref\|YP_171566.1\| mutator MutT protein [Synechococcus elongatus PCC 6301], gi\|56685824\|db...	131.0	[0..2]	[132..226]
gi\|33864651, gi\|... - gi\|33864651\|ref\|NP_896210.1\| putative adenine glycosylase [Synechococcus sp. WH 8102], gi\|33632174\|e...	126.0	[0..3]	[132..248]
gi\|84519058, gi\|... - gi\|84519058\|ref\|ZP_01006407.1\| A/G-specific DNA glycosylase [Prochlorococcus marinus str. MIT 9211],...	124.0	[0..9]	[135..266]
gi\|23127709, gi\|... - gi\|23127709\|ref\|ZP_00109572.1\| COG0494: NTP pyrophosphohydrolases including oxidative damage repair ...	124.0	[0..5]	[130..8]
gi\|78168021, gi\|... - gi\|78183727\|ref\|YP_376161.1\| Mutator MutT [Synechococcus sp. CC9902], gi\|78168021\|gb\|ABB25118.1\| A/G...	124.0	[0..3]	[134..208]
gi\|33238768, gi\|... - gi\|33241238\|ref\|NP_876180.1\| A/G-specific DNA glycosylase [Prochlorococcus marinus subsp. marinus st...	124.0	[0..3]	[135..260]
gi\|116071694, gi... - gi\|116071694\|ref\|ZP_01468962.1\| Mutator MutT [Synechococcus sp. BL107], gi\|116065317\|gb\|EAU71075.1\| ...	123.0	[0..3]	[134..240]

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Predicted Domain #1

Region A:
Residues: [1-136]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTFPSKHKQI GVAVIINDQG EVLIDRRPVG GSFGGLWEFP GGKLEPGETA AECIVREVRE  60
   61 EIAIEVAVGE SLITIDHSYP QVRLTLYVHL CQYLSGQPQT IACEEIRWVA ITDLGEYRFP 120
  121 KANGEIIQAL RQKFLS

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	23.09691
Match:	1mutA
Description:	NMR STUDY OF MUTT ENZYME, A NUCLEOSIDE TRIPHOSPHATE PYROPHOSPHOHYDROLASE
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	1.86119802438676	bayes_pls_golite062009
hydrolase activity	0.97790691270817	bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	0.544115189438	bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides	0.54377405132398	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: