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View Structure Prediction Details

Protein: gi|13422632, gi|...
Organism: Caulobacter crescentus CB15
Length: 682 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|13422632, gi|....

Description E-value Query
Range
Subject
Range
gi|71736579, gi|... - gi|71736579|ref|YP_275170.1| phytase domain-containing protein [Pseudomonas syringae pv. phaseolicol...
612.0 [0..67] [682..59]

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Predicted Domain #1
Region A:
Residues: [1-101]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTRGSAMTR LKLAASLLAL LTAAPALAQT TSPAVSVAGA TAPTAQGGAN AVALLRDPTH  60
   61 PAKSVIAVNA KLGGLEFYGL DGQRITAVPG GEIYAVDTRE D

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.25
Match: 1qlgA
Description: Thermostable phytase (3-phytase)
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [102-509]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GPRALVVALD RQAGRLRLFA RDYASGAIAA VDARPLQLGY SGEGVCLHRS GRDGALYAFA  60
   61 LGDEGQLDQW LLYPTADGKL DGRVVRRLHL SSEAKFCVAD DASGALYVAQ EAVGVWRYDA 120
  121 DPEADPVPTI VDINRLGHLA GEVAGLALIN GGKGADYLIA ANAEAGDYNV YDRSAGDRFI 180
  181 GAFKVETNGA PAIQEPSGLF GVRAPIGERL PAGGLLIADD RNVGANSKIL SWADIAASMK 240
  241 LALGQDTPSV EPSKVALVQA TMETQPVAHD GDAADDPAIW VHPTTPAKSA IIATDKKGGM 300
  301 LVYDLSGKQL QYLPDGKMNN VDLRDGFKLG GKAVTLIAAS DRTHKAIALY TIDPETRLLT 360
  361 SVADGVQASG LSDPYGLCMH RDRKGDMSVF VSDPDGLVRQ YSLTATAN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 21.522879
Match: 1ri6A
Description: Structure of a putative isomerase from E. coli
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.674956488426836 bayes_pls_golite062009

Predicted Domain #3
Region A:
Residues: [510-682]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GKVRAKAVRD LKFDTQTEGC VADDETGALY IAEEDVALWK LGADARSGPA RKAIARVADN  60
   61 PALKDDLEGV GLYIQPKGKG YLILSSQGNN TYAVFRREGD NAYVGSFAVT ANGDTDVDGI 120
  121 SETDGLDVSS ASLGAGLEMG AFVAQDGRNI SPPEAQNFKL VPWSKISAKL GLP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 120.0
Match: 1pooA
Description: Thermostable phytase (3-phytase)
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle