| Protein: | peb-PB, peb-PA |
| Organism: | Drosophila melanogaster |
| Length: | 1894 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for peb-PB, peb-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
2005.0 | [0..20] | [1892..1] |
|
Region A: Residues: [1-215] |
1 11 21 31 41 51
| | | | | |
1 MLAAQQQHNN STVESEMERQ RRDSTTSESS LEHLDLGRTP KKLGGNSGST QTTSTPHELA 60
61 TVTSSRKRKI RHLQLNHHQQ QQHHQQSDLL SDEDVAEAEA EEDEDEEDGD QVAALGSRNL 120
121 GRHKQRRSGG ATTQASIVMD YSSGDASSLR KKFRLNRSAA SLSESGFVDA SSTTGHSGYL 180
181 GNSSSATNTT ATSGIGASAV APSPVGGAAI NAASS
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [216-398] |
1 11 21 31 41 51
| | | | | |
1 SSGSSSGGSG GSSPQGQCLS SGESGIGAGD EHMKYLCPIC EVVSATPHEF TNHIRCHNYA 60
61 NGDTENFTCR ICSKVLSSAS SLDRHVLVHT GERPFNCRYC HLTFTTNGNM HRHMRTHKQH 120
121 QVAQSQSQSQ QQQSLQQQQQ SQQQRRQQQQ HQPSQQQQNP AQQQLMGNTL SARAESYESD 180
181 ASC
|
| Detection Method: | |
| Confidence: | 5.0 |
| Match: | 1un6B |
| Description: | THE CRYSTAL STRUCTURE OF A ZINC FINGER - RNA COMPLEX REVEALS TWO MODES OF MOLECULAR RECOGNITION |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [399-505] |
1 11 21 31 41 51
| | | | | |
1 STDVSSGHSH SRSSSSLNNN NNNSHKANNN LKDLEELEVS TEDQDTENKQ RRLKTTINNN 60
61 IIESEQQEDM DDEEADDADV AMLTSTPDVA TLLAGASASG AASRSPT
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [506-609] |
1 11 21 31 41 51
| | | | | |
1 PSPSASPALL LSCPACGASD FETLPALCVH LDAMHSDIPA KCRDCEVIFA THRQLQSHCC 60
61 RLPNALAGGL PPLLGASSSP LHNEEPEDEE HGDDEDLEQK ERLA
|
| Detection Method: | |
| Confidence: | 0.997 |
| Match: | 2adrA |
| Description: | ADR1 DNA-BINDING DOMAIN FROM SACCHAROMYCES CEREVISIAE, NMR, 25 STRUCTURES |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [610-673] |
1 11 21 31 41 51
| | | | | |
1 SQSEDFFHQL YLKHKTANGC GAISHPPSPI KHEPADTKDL ADIQSILNMT SSSSSFLRNF 60
61 EQSV
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [674-806] |
1 11 21 31 41 51
| | | | | |
1 NTPNSSQYSL DGRDQEEEAQ DAFTSEFRRM KLRGEFPCKL CTAVFPNLRA LKGHNRVHLG 60
61 AVGPAGPFRC NMCPYAVCDK AALVRHMRTH NGDRPYECAV CNYAFTTKAN CERHLRNRHG 120
121 KTSREEVKRA IVY
|
| Detection Method: | |
| Confidence: | 16.09691 |
| Match: | 2dlqA |
| Description: | No description for 2dlqA was found. |
| Term | Confidence | Notes |
| binding | 0.414217765611205 | bayes_pls_golite062009 |
|
Region A: Residues: [807-904] |
1 11 21 31 41 51
| | | | | |
1 HPAEDAGCED SKSRLGEDLA DTSFRSISPT PPPPPVNESK SQLKHMLLGE NHLAPVNQQP 60
61 PLKIQVKSLD QLVDKKPSAP APQQQQQQQQ QEKSGSAL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [905-1250] |
1 11 21 31 41 51
| | | | | |
1 DFSMDVLDLS KKPTGGASLT PAVTRTPTPA AVAPVTPGGV GTPDLAAAIE QQQLLLAQQQ 60
61 LFGAGGEYMQ QLFRSLMFQS QTSGFPFFPF MAPPPPQANP EKPPMVSPPN RINPMPVGVG 120
121 VGVPVPPGGP VKMVIKNGVL MPKQKQRRYR TERPFACEHC SARFTLRSNM ERHVKQQHPQ 180
181 FYAQRQRSGH HVMRGRGASN VAAAAAAAAA AAAATVMAGG PGSSGFGSNH HHGHGHGSHG 240
241 SHGHAPISEQ VKCAILAQQL KAHKNTDLLQ QALAHGSSSV AGNPLLHFGY PLTNPSPMHN 300
301 GSSQGNGQAT AMDDDEPKLI IDEDENEHDH EVEAEDVDDF EEDEDE
|
| Detection Method: | |
| Confidence: | 4.1 |
| Match: | 2i13A |
| Description: | No description for 2i13A was found. |
|
Region A: Residues: [1251-1414] |
1 11 21 31 41 51
| | | | | |
1 EEMDEPEDEP ELILDEQPAE KEAEEEQELP KPLEQLGTKE AAQKMAETIL EQAIKAGKPL 60
61 SPPPTKENAS PANPTVATTM QEPAITAPST NPSSLKTMIA QAEYVGKSLK EVASSPFKDE 120
121 SQDLVPVAKL VDNATSQNMG FNSYFRPSDV ANHMEQSDEE GLVA
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1415-1672] |
1 11 21 31 41 51
| | | | | |
1 SGSASESNNS GTEDVTSSSS SSEPKKKSAY SLAPNRVSCP YCQRMFPWSS SLRRHILTHT 60
61 GQKPFKCSHC PLLFTTKSNC DRHLLRKHGN VESAMSVYVP TEDVSEPIPV PKSVEEIELE 120
121 EQRRRQEAER EKELELERER ELERERELER ERQLEKEKER ERQQLIQKLA AQMNAAATAA 180
181 AVVAAASAVN GGASGGPHGP IADALAGGDL PYKCHLCEGS FAERLQCLEH IKQAHAHEYA 240
241 LLLAKGAIET ESLEANPH
|
| Detection Method: | |
| Confidence: | 18.045757 |
| Match: | 2gliA |
| Description: | Five-finger GLI1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.414217765611205 | bayes_pls_golite062009 |
|
Region A: Residues: [1673-1894] |
1 11 21 31 41 51
| | | | | |
1 QQPSQQAVHS DDEAPNGGGN RGKYPDYSNR KVICAFCLRR FWSTEDLRRH MRTHSGERPF 60
61 QCDICLRKFT LKHSMLRHMK KHSGRAHNGD TPGSDCSDDE QVSSPPSTPH PTQPTSANNN 120
121 NSCHNNNNNA NNNNNNNNNN NNNNSSSKLG LKLHDLLDKA SEWRASRLGE HKENMGEATP 180
181 SGATVAGSDL IGNLLGISDQ GILNKLLSSA DEAAKLLGVD NK
|
| Detection Method: | |
| Confidence: | 60.0 |
| Match: | 2i13A |
| Description: | No description for 2i13A was found. |
