YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30254322, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	231 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30254322, gi|....

Description	E-value	Query Range	Subject Range
gi\|42779872, gi\|... - gi\|42779872\|ref\|NP_977119.1\| transcriptional activator TenA, putative [Bacillus cereus ATCC 10987], ... gi\|221238536, gi... - gi\|222094478\|ref\|YP_002528538.1\| transcriptional regulator of extracellular enzymes [Bacillus cereus... gi\|217066360, gi... - gi\|217958308\|ref\|YP_002336856.1\| putative transcriptional activator TenA [Bacillus cereus AH187], gi... gi\|206744585, gi... - gi\|206977269\|ref\|ZP_03238167.1\| putative transcriptional activator TenA [Bacillus cereus H3081.97], ...	1.0E-64	[1..231]	[1..231]
gi\|29894443, gi\|... - gi\|30018901\|ref\|NP_830532.1\| transcriptional activator tenA [Bacillus cereus ATCC 14579], gi\|2989444...	2.0E-64	[1..231]	[1..231]
gi\|49331834, gi\|... - gi\|49480278\|ref\|YP_034980.1\| transcriptional regulator of extracellular enzyme [Bacillus thuringiens...	2.0E-64	[1..231]	[1..231]
gi\|89203244, gi\|... - gi\|89203244\|ref\|ZP_01181932.1\| TENA/THI-4 protein [Bacillus cereus subsp. cytotoxis NVH 391-98], gi\|...	4.0E-64	[1..231]	[1..231]
gi\|228899412, gi... - gi\|228899412\|ref\|ZP_04063669.1\| Transcriptional activator [Bacillus thuringiensis IBL 4222], gi\|2288... gi\|218895781, gi... - gi\|218895781\|ref\|YP_002444192.1\| putative transcriptional activator TenA [Bacillus cereus G9842], gi... gi\|75762115, gi\|... - gi\|75762115\|ref\|ZP_00742018.1\| Transcriptional activator tenA [Bacillus thuringiensis serovar israel...	2.0E-63	[1..231]	[1..231]
gi\|163938647, gi... - gi\|89207107\|ref\|ZP_01185655.1\| TENA/THI-4 protein [Bacillus weihenstephanensis KBAB4], gi\|89155009\|g...	4.0E-63	[1..231]	[1..231]
gi\|25300832 - pir\|\|G83984 transcription regulator of extracellular enzyme genes tenA [imported] - Bacillus halodur... TENA_BACHD - Aminopyrimidine aminohydrolase OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 /...	1.0E-57	[1..222]	[1..222]
gi\|47568738, gi\|... - gi\|47568738\|ref\|ZP_00239434.1\| transcriptional regulator [Bacillus cereus G9241], gi\|47554632\|gb\|EAL...	4.0E-56	[1..230]	[1..228]
gi\|65319915 - gi\|65319915\|ref\|ZP_00392874.1\| COG0819: Putative transcription activator [Bacillus anthracis str. A2... gi\|190563362, gi... - gi\|190565335\|ref\|ZP_03018255.1\| transcriptional activator TenA [Bacillus anthracis Tsiankovskii-I], ... gi\|229604132, gi... - gi\|229604132\|ref\|YP_002866915.1\| transcriptional activator TenA [Bacillus anthracis str. A0248], gi\|... gi\|228915196, gi... - gi\|228915196\|ref\|ZP_04078791.1\| Thiaminase-2 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1], ... gi\|170685333, gi... - gi\|170685333\|ref\|ZP_02876557.1\| transcriptional activator TenA [Bacillus anthracis str. A0465], gi\|1... gi\|177649452, gi... - gi\|177649452\|ref\|ZP_02932454.1\| transcriptional activator TenA [Bacillus anthracis str. A0174], gi\|1... gi\|227003321, gi... - gi\|227814574\|ref\|YP_002814583.1\| transcriptional activator TenA [Bacillus anthracis str. CDC 684], g...	8.0E-56	[1..230]	[10..237]

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Predicted Domain #1

Region A:
Residues: [1-231]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFCDRLLET VQPVWEMSHN HPFVVGMGDG TLEKDKFQYY IIQDYLYLLD YAKLYAIGVV  60
   61 KATNPQVMGK FAEQIDGILN GEMTIHKQYA KRLGISIEEI ESAKPSAKNL AYTNYMMSVS 120
  121 QNGTLAELIA ALLPCMWSYW EIGKRLNDIP GARDHEFFGE WIQGYSSEEY GNLCIWLIDL 180
  181 LNEMAVGKSE KELDRLEEIF LYSSRFEYLF WDMSYRKEMW GFEEQEHTTV S

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	52.69897
Match:	1to9A
Description:	Crystal structure of THI-4 protein from Bacillus subtilis
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
transcription regulator activity	0.91081735217593	bayes_pls_golite062009
catalytic activity	0.846500584774474	bayes_pls_golite062009
binding	0.463801341295592	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: