YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30255350, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	298 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30255350, gi|....

Description	E-value	Query Range	Subject Range
gi\|19888339, gi\|... - gi\|20095063\|ref\|NP_614910.1\| branched-chain amino acid aminotransferase [Methanopyrus kandleri AV19]...	2.0E-94	[1..285]	[1..286]
gi\|146295873, gi... - gi\|82499813\|ref\|ZP_00885249.1\| Branched-chain amino acid aminotransferase I [Caldicellulosiruptor sa...	7.0E-93	[1..293]	[1..293]
gi\|228692877, gi... - gi\|229090451\|ref\|ZP_04221692.1\| Branched-chain amino acid aminotransferase [Bacillus cereus Rock3-42... gi\|49480127, gi\|... - gi\|49480127\|ref\|YP_035614.1\| branched-chain amino acid aminotransferase [Bacillus thuringiensis sero... gi\|196026977, gi... - gi\|196042204\|ref\|ZP_03109486.1\| branched-chain amino acid aminotransferase [Bacillus cereus NVH0597-...	2.0E-92	[1..298]	[1..298]
gi\|47556838, gi\|... - gi\|47566285\|ref\|ZP_00237313.1\| branched-chain amino acid aminotransferase [Bacillus cereus G9241], g...	3.0E-92	[1..298]	[1..298]
gi\|228611477, gi... - gi\|229172134\|ref\|ZP_04299699.1\| Branched-chain amino acid aminotransferase [Bacillus cereus MM3], gi... gi\|229138186, gi... - gi\|229138186\|ref\|ZP_04266782.1\| Branched-chain amino acid aminotransferase [Bacillus cereus BDRD-ST2... gi\|42780590, gi\|... - gi\|42780590\|ref\|NP_977837.1\| branched-chain amino acid aminotransferase [Bacillus cereus ATCC 10987]... gi\|229029173, gi... - gi\|229029173\|ref\|ZP_04185266.1\| Branched-chain amino acid aminotransferase [Bacillus cereus AH1271],... gi\|228775101, gi... - gi\|228984574\|ref\|ZP_04144749.1\| Branched-chain amino acid aminotransferase [Bacillus thuringiensis s... gi\|221239187, gi... - gi\|222095129\|ref\|YP_002529189.1\| branched-chain amino acid aminotransferase [Bacillus cereus Q1], gi... gi\|217066841, gi... - gi\|217958973\|ref\|YP_002337521.1\| branched-chain amino acid aminotransferase [Bacillus cereus AH187],... gi\|206744184, gi... - gi\|206977611\|ref\|ZP_03238504.1\| branched-chain amino acid aminotransferase [Bacillus cereus H3081.97... gi\|229195695, gi... - gi\|229195695\|ref\|ZP_04322458.1\| Branched-chain amino acid aminotransferase [Bacillus cereus m1293], ...	7.0E-92	[1..298]	[1..298]
gi\|20905479, gi\|... - gi\|21227147\|ref\|NP_633069.1\| branched-chain amino acid aminotransferase [Methanosarcina mazei Go1], ...	8.0E-92	[1..292]	[3..293]
gi\|110602591, gi... - gi\|110602591\|ref\|ZP_01390668.1\| branched-chain amino acid aminotransferase [Methanoculleus marisnigr...	1.0E-91	[5..281]	[41..316]
gi\|228674422, gi... - gi\|229108953\|ref\|ZP_04238554.1\| Branched-chain amino acid aminotransferase [Bacillus cereus Rock1-15... gi\|228726098, gi... - gi\|229043237\|ref\|ZP_04190959.1\| Branched-chain amino acid aminotransferase [Bacillus cereus AH676], ... gi\|228978100, gi... - gi\|228978100\|ref\|ZP_04138478.1\| Branched-chain amino acid aminotransferase [Bacillus thuringiensis B... gi\|228788149, gi... - gi\|228971490\|ref\|ZP_04132114.1\| Branched-chain amino acid aminotransferase [Bacillus thuringiensis s... gi\|229189577, gi... - gi\|229189577\|ref\|ZP_04316592.1\| Branched-chain amino acid aminotransferase [Bacillus cereus ATCC 108... gi\|229149696, gi... - gi\|229149696\|ref\|ZP_04277926.1\| Branched-chain amino acid aminotransferase [Bacillus cereus m1550], ... gi\|228639315, gi... - gi\|229144096\|ref\|ZP_04272511.1\| Branched-chain amino acid aminotransferase [Bacillus cereus BDRD-ST2... gi\|228656751, gi... - gi\|229126811\|ref\|ZP_04255823.1\| Branched-chain amino acid aminotransferase [Bacillus cereus BDRD-Cer... gi\|30019546, gi\|... - gi\|30019546\|ref\|NP_831177.1\| branched-chain amino acid aminotransferase [Bacillus cereus ATCC 14579]... gi\|228957772, gi... - gi\|228957772\|ref\|ZP_04119513.1\| Branched-chain amino acid aminotransferase [Bacillus thuringiensis s... gi\|218235632, gi... - gi\|218235632\|ref\|YP_002366178.1\| branched-chain amino acid aminotransferase [Bacillus cereus B4264],... gi\|228938609, gi... - gi\|228938609\|ref\|ZP_04101214.1\| Branched-chain amino acid aminotransferase [Bacillus thuringiensis s... gi\|228852459, gi... - gi\|228907127\|ref\|ZP_04070989.1\| Branched-chain amino acid aminotransferase [Bacillus thuringiensis I...	1.0E-91	[1..298]	[1..298]
ILVE_SALTY - Branched-chain-amino-acid aminotransferase OS=Salmonella typhimurium GN=ilvE PE=1 SV=2 ILVE_SALTI - Branched-chain-amino-acid aminotransferase OS=Salmonella typhi GN=ilvE PE=3 SV=2 ILVE_SALTY - Branched-chain-amino-acid aminotransferase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 7... gi\|213981032 - gi\|213981032\|ref\|ZP_03408291.1\| branched-chain amino acid aminotransferase [Salmonella enterica subs... gi\|213864754 - gi\|213864754\|ref\|ZP_03386873.1\| branched-chain amino acid aminotransferase [Salmonella enterica subs... ILVE_SALTI - Branched-chain-amino-acid aminotransferase OS=Salmonella typhi GN=ilvE PE=3 SV=2 gi\|213646697 - gi\|213646697\|ref\|ZP_03376750.1\| branched-chain amino acid aminotransferase [Salmonella enterica subs... gi\|29143717, gi\|... - gi\|29143717\|ref\|NP_807059.1\| branched-chain amino acid aminotransferase [Salmonella enterica subsp. ... gi\|16762228 - gi\|16762228\|ref\|NP_457845.1\| branched-chain amino acid aminotransferase [Salmonella enterica subsp. ... gi\|167553329, gi... - gi\|205322227\|gb\|EDZ10066.1\| branched-chain amino acid aminotransferase [Salmonella enterica subsp. e... ILVE_SALTY - Branched-chain-amino-acid aminotransferase OS=Salmonella typhimurium GN=ilvE PE=1 SV=2 gi\|161617020, gi... - gi\|161617020\|ref\|YP_001590985.1\| branched-chain amino acid aminotransferase [Salmonella enterica sub... lcl\|NC_016856.1_... - [gene=ilvE] [protein=branched-chain amino acid aminotransferase] [protein_id=YP_005240165.1] [locati... gi\|213425638 - gi\|213425638\|ref\|ZP_03358388.1\| branched-chain amino acid aminotransferase [Salmonella enterica subs... gi\|194713775, gi... - gi\|194738273\|ref\|YP_002116837.1\| branched-chain amino acid aminotransferase [Salmonella enterica sub... gi\|168238357, gi... - gi\|197288739\|gb\|EDY28114.1\| branched-chain amino acid aminotransferase [Salmonella enterica subsp. e... gi\|167994598, gi... - gi\|205327552\|gb\|EDZ14316.1\| branched-chain amino acid aminotransferase [Salmonella enterica subsp. e...	1.0E-91	[4..294]	[7..303]
gi\|56415762, gi\|... - gi\|56415762\|ref\|YP_152837.1\| branched-chain amino acid aminotransferase [Salmonella enterica subsp. ... gi\|197364691, gi... - gi\|197364691\|ref\|YP_002144328.1\| branched-chain amino acid aminotransferase [Salmonella enterica sub...	2.0E-91	[4..294]	[7..303]

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Predicted Domain #1

Region A:
Residues: [1-298]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNEQWIFLNG EFVPKDEAKV SVYDHGYLYG DGVFEGIRVY SGNVFRLREH LVRLYESAKS  60
   61 IMLEIPYSLD EITNIVVETI RQNKLSNGYI RLVVSRGAGN LGLDPDSCTK PNVVVIAEQL 120
  121 SLFPQEYYEK GIPVVTVATR RNRPDVLSPQ VKSLNYLNNI LVRIEAKLAG VQEALMLNDQ 180
  181 GYVAEGSGDN VFIVKGNKLI TPPSSAGALE GITRNAILEI GEKLGYDVRE ELFTRHDVYV 240
  241 ADEVFLTGTA AEVIAVTTVD GRTIGLGQTG PHTNRLLEEF RKLVIEDGEK IYEENKVG

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	92.69897
Match:	1a3gA
Description:	Branched-chain aminoacid aminotransferase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
D-alanine:2-oxoglutarate aminotransferase activity	5.92270586163256	bayes_pls_golite062009
branched-chain-amino-acid transaminase activity	4.40524391258229	bayes_pls_golite062009
transferase activity, transferring nitrogenous groups	2.8158800446404	bayes_pls_golite062009
transaminase activity	2.8068647476058	bayes_pls_golite062009
catalytic activity	2.79277628243817	bayes_pls_golite062009
4-amino-4-deoxychorismate lyase activity	2.07400020867227	bayes_pls_golite062009
L-alanine:2-oxoglutarate aminotransferase activity	1.88117354921159	bayes_pls_golite062009
alanine-oxo-acid transaminase activity	1.88117354921159	bayes_pls_golite062009
transferase activity	1.36772068349993	bayes_pls_golite062009
oxo-acid-lyase activity	0.20929492402161	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: