YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30262255, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	218 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30262255, gi|....

Description	E-value	Query Range	Subject Range
paqr-2 - status:Partially_confirmed UniProt:Q9N536 protein_id:AAF60489.2	2.0E-51	[5..210]	[300..529]
gi\|39580647, gi\|... - gi\|39580647\|emb\|CAE61329.1\| Hypothetical protein CBG05167 [Caenorhabditis briggsae], gi\|187035172\|em... gi\|157773563 - gi\|157773563\|ref\|XP_001664847.1\| hypothetical protein CBG05167 [Caenorhabditis briggsae AF16]	5.0E-51	[5..210]	[305..534]
gi\|54637593, gi\|... - gi\|54637593\|gb\|EAL26995.1\| GA18798-PA [Drosophila pseudoobscura], gi\|125773203\|ref\|XP_001357860.1\| G...	2.0E-47	[3..210]	[186..417]
gi\|56119026, gi\|... - gi\|56119026\|ref\|NP_001007855.1\| adiponectin receptor 2 [Gallus gallus], gi\|53127374\|emb\|CAG31070.1\| ...	4.0E-47	[3..210]	[132..365]
ADR2_MOUSE - Adiponectin receptor protein 2 OS=Mus musculus GN=Adipor2 PE=1 SV=2	7.0E-47	[3..210]	[133..366]
CG5315-PA, CG531... - This gene is referred to in FlyBase by the symbol Dmel\CG5315 (CG5315, FBgn0038984). It is a protein... gi\|220953776, gi... - gi\|220953776\|gb\|ACL89431.1\| CG5315-PA [synthetic construct], gi\|220943902\|gb\|ACL84494.1\| CG5315-PA [...	8.0E-47	[3..210]	[191..422]
gi\|85719404 - gi\|85719404\|gb\|ABC75392.1\| adiponectin receptor 2 [Anas platyrhynchos]	8.0E-47	[3..210]	[132..365]
gi\|48686699, gi\|... - gi\|55742866\|ref\|NP_001007193.1\| adiponectin receptor 2 [Sus scrofa], gi\|48686699\|gb\|AAT46063.1\| adip... gi\|55742866 - ref\|NP_001007193.1\| adiponectin receptor 2 [Sus scrofa]	2.0E-46	[3..210]	[133..366]
ADIPOR2 - adiponectin receptor 2 gi\|114642805 - gi\|114642805\|ref\|XP_508922.2\| PREDICTED: adiponectin receptor 2 [Pan troglodytes]	3.0E-46	[3..210]	[133..366]

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Predicted Domain #1

Region A:
Residues: [1-218]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTEKMTRMTQ FVKEEIANAI THGIGAILSI PALIILIIHA SKHGTASAVV AFTVYGVSMF  60
   61 LLYLFSTLLH SIHHPKVEKL FTILDHSAIY LLIAGTYTPF LLITLRGPLG WTLLAIIWTL 120
  121 AIGGIIFKIF FVRRFIKAST LCYIIMGWLI IVAIKPLYEN LTGHGFSLLL AGGILYSVGA 180
  181 IFFLWEKLPF NHAIWHLFVL GGSAMMFFCV LFYVLPTA

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	66.200659
Match:	PF03006.11
Description:	No description for PF03006.11 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits