YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30257971, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	222 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30257971, gi|....

Description	E-value	Query Range	Subject Range
TAL_AQUAE - Probable transaldolase OS=Aquifex aeolicus (strain VF5) GN=tal PE=3 SV=1 TAL_AQUAE - Probable transaldolase OS=Aquifex aeolicus GN=tal PE=3 SV=1	3.0E-80	[1..221]	[1..214]
TAL_THEMA - Transaldolase OS=Thermotoga maritima GN=tal PE=1 SV=1 TAL_THEMA - Transaldolase OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=tal PE=1 S...	9.0E-80	[1..218]	[1..211]
gi\|58177039, gi\|... - gi\|58177049\|pdb\|1VPX\|T Chain T, Crystal Structure Of Transaldolase (Ec 2.2.1.2) (Tm0295) From Thermo...	9.0E-80	[1..218]	[13..223]
TAL2_BACCR - Probable transaldolase 2 OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 / NBRC 15305 / NC...	3.0E-79	[1..222]	[1..222]
TAL_GEOUR - Probable transaldolase OS=Geobacter uraniireducens (strain Rf4) GN=tal PE=3 SV=1	7.0E-79	[1..221]	[1..214]
TAL_METMP - Probable transaldolase OS=Methanococcus maripaludis (strain S2 / LL) GN=tal PE=3 SV=1 TAL_METMP - Probable transaldolase OS=Methanococcus maripaludis GN=tal PE=3 SV=1	1.0E-78	[1..218]	[1..211]
gi\|49330562, gi\|... - gi\|49479006\|ref\|YP_037486.1\| putative translaldolase [Bacillus thuringiensis serovar konkukian str. ...	1.0E-78	[1..222]	[1..222]
gi\|163863222, gi... - gi\|89206462\|ref\|ZP_01185020.1\| Transaldolase C [Bacillus weihenstephanensis KBAB4], gi\|89155583\|gb\|E... gi\|229012587, gi... - gi\|229012587\|ref\|ZP_04169761.1\| Transaldolase [Bacillus mycoides DSM 2048], gi\|228748747\|gb\|EEL98598... gi\|228615367, gi... - gi\|229168123\|ref\|ZP_04295851.1\| Transaldolase [Bacillus cereus AH621], gi\|228615367\|gb\|EEK72464.1\| T...	1.0E-78	[1..222]	[1..222]
TAL_METJA - Probable transaldolase OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM ... TAL_METJA - Probable transaldolase OS=Methanocaldococcus jannaschii GN=tal PE=3 SV=1	2.0E-78	[1..216]	[1..209]
TAL_ANADE - Probable transaldolase OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=tal PE=3 SV=1	5.0E-78	[1..221]	[1..214]

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Predicted Domain #1

Region A:
Residues: [1-222]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFFIDTANL EDIKKAYKLG VLAGVTTNPS LVAKEGIKFE DRIAEICQAV PKVESVSAEV  60
   61 TPDAVTAEEM IAQAEELIKI NGGDEKVTIK LPMTLAGLEA CRYLTEKGVK TNVTLIFTVN 120
  121 QALLAARAGA TYVSPFLGRL DDISEDGVLL VAKIAELFDV HQLDTQIIAA SVRHPDHVTR 180
  181 VAMAGAHIAT IPYKVIEQLA MHPLTDQGIE KFAADWAKAP KL

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	81.221849
Match:	1vpxA
Description:	Crystal structure of Transaldolase (EC 2.2.1.2) (TM0295) from Thermotoga maritima at 2.40 A resolution
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
transferase activity, transferring aldehyde or ketonic groups	3.28746773527289	bayes_pls_golite062009
transaldolase activity	2.77878684721788	bayes_pls_golite062009
catalytic activity	2.67031204377352	bayes_pls_golite062009
fructose-bisphosphate aldolase activity	1.41110985630781	bayes_pls_golite062009
porphobilinogen synthase activity	0.658378297259497	bayes_pls_golite062009
fructose binding	0.427637212154492	bayes_pls_golite062009
aldehyde-lyase activity	0.351872954170322	bayes_pls_golite062009
transferase activity, transferring alkyl or aryl (other than methyl) groups	0.0319140634878892	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: