YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30259968, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	144 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30259968, gi|....

Description	E-value	Query Range	Subject Range
gi\|89095668, gi\|... - gi\|89095668\|ref\|ZP_01168562.1\| (3R)-hydroxymyristoyl ACP dehydratase [Bacillus sp. NRRL B-14911], gi...	4.0E-49	[1..144]	[1..144]
FABZ_BACHK - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Bacillus thuringiensis subsp. konkukian (st... gi\|206970167, gi... - gi\|206970167\|ref\|ZP_03231120.1\| beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ [Bacillus c... FABZ_BACC4 - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Bacillus cereus (strain B4264) GN=fabZ PE=3... gi\|196023587, gi... - gi\|196045756\|ref\|ZP_03112986.1\| beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ [Bacillus c... FABZ_BACC2 - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Bacillus cereus (strain G9842) GN=fabZ PE=3... FABZ_BACCQ - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Bacillus cereus (strain Q1) GN=fabZ PE=3 SV... gi\|228903752, gi... - gi\|228903752\|ref\|ZP_04067869.1\| (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase [Bacillus t... FABZ_BACC3 - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Bacillus cereus (strain 03BB102) GN=fabZ PE... gi\|228823077, gi... - gi\|228936562\|ref\|ZP_04099357.1\| (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase [Bacillus t... gi\|228924013, gi... - gi\|228924013\|ref\|ZP_04087289.1\| (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase [Bacillus t... gi\|228955524, gi... - gi\|228955524\|ref\|ZP_04117528.1\| (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase [Bacillus t... gi\|228942424, gi... - gi\|228942424\|ref\|ZP_04104962.1\| (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase [Bacillus t... gi\|228968399, gi... - gi\|228968399\|ref\|ZP_04129393.1\| (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase [Bacillus t... gi\|228798159, gi... - gi\|228961541\|ref\|ZP_04123151.1\| (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase [Bacillus t... FABZ_BACHK - (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Bacillus thuringiensis subsp. konkukian ... gi\|228981993, gi... - gi\|228981993\|ref\|ZP_04142287.1\| (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase [Bacillus t... gi\|228784339, gi... - gi\|228975357\|ref\|ZP_04135913.1\| (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase [Bacillus t... gi\|228716356, gi... - gi\|229063927\|ref\|ZP_04200227.1\| (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase [Bacillus c... gi\|229032908, gi... - gi\|229032908\|ref\|ZP_04188863.1\| (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase [Bacillus c... FABZ_BACC1 - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Bacillus cereus (strain ATCC 10987 / NRS 24... gi\|228706677, gi... - gi\|229076491\|ref\|ZP_04209453.1\| (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase [Bacillus c... gi\|229072745, gi... - gi\|229072745\|ref\|ZP_04205945.1\| (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase [Bacillus c... gi\|229099711, gi... - gi\|229099711\|ref\|ZP_04230637.1\| (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase [Bacillus c... gi\|228700925, gi... - gi\|229082493\|ref\|ZP_04214956.1\| (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase [Bacillus c... gi\|228670822, gi... - gi\|229112690\|ref\|ZP_04242226.1\| (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase [Bacillus c... gi\|228677529, gi... - gi\|229105870\|ref\|ZP_04236496.1\| (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase [Bacillus c... gi\|228652868, gi... - gi\|229130529\|ref\|ZP_04259485.1\| (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase [Bacillus c... FABZ_BACCR - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Bacillus cereus (strain ATCC 14579 / DSM 31... gi\|229118773, gi... - gi\|229118773\|ref\|ZP_04248124.1\| (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase [Bacillus c... gi\|228635644, gi... - gi\|229147816\|ref\|ZP_04276158.1\| (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase [Bacillus c... gi\|228647413, gi... - gi\|229136092\|ref\|ZP_04264848.1\| (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase [Bacillus c... gi\|228607544, gi... - gi\|229175950\|ref\|ZP_04303447.1\| (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase [Bacillus c... gi\|228619245, gi... - gi\|229164223\|ref\|ZP_04292157.1\| (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase [Bacillus c... gi\|228596023, gi... - gi\|229187502\|ref\|ZP_04314644.1\| (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase [Bacillus c... gi\|229181526, gi... - gi\|229181526\|ref\|ZP_04308852.1\| (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase [Bacillus c... FABZ_BACWK - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Bacillus weihenstephanensis (strain KBAB4) ... gi\|228589953, gi... - gi\|229193528\|ref\|ZP_04320474.1\| (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase [Bacillus c... FABZ_BACAH - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Bacillus thuringiensis (strain Al Hakam) GN...	9.0E-48	[1..144]	[1..144]
FABZ_ROSS1 - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Roseiflexus sp. (strain RS-1) GN=fabZ PE=3 ...	3.0E-47	[1..143]	[1..143]
FABZ_BACLD - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Bacillus licheniformis (strain ATCC 14580 /...	3.0E-47	[1..144]	[1..144]
gi\|213969129, gi... - gi\|213969129\|ref\|ZP_03397268.1\| beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ [Pseudomona... FABZ_PSESM - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Pseudomonas syringae pv. tomato (strain DC3... FABZ_PSESM - (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Pseudomonas syringae pv. tomato GN=fabZ ...	6.0E-47	[1..142]	[1..146]
FABZ_PHOPR - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Photobacterium profundum GN=fabZ PE=3 SV=1 FABZ_PHOPR - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Photobacterium profundum (strain SS9) GN=fa...	7.0E-47	[2..141]	[8..149]
FABZ_PSEU2 - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Pseudomonas syringae pv. syringae (strain B... FABZ_PSE14 - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Pseudomonas savastanoi pv. phaseolicola (st... tr\|F3G1L3\|F3G1L3... - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Pseudomonas syringae pv. pisi str. 1704B GN... gi\|237800154 - gi\|237800154\|ref\|ZP_04588615.1\| (3R)-hydroxymyristoyl-ACP dehydratase [Pseudomonas syringae pv. oryz...	9.0E-47	[1..142]	[1..146]
FABZ_GEOKA - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Geobacillus kaustophilus (strain HTA426) GN... FABZ_GEOKA - (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Geobacillus kaustophilus GN=fabZ PE=3 SV...	9.0E-47	[1..142]	[1..142]
gi\|90413540, gi\|... - gi\|90413540\|ref\|ZP_01221531.1\| (3R)-hydroxymyristoyl ACP dehydratase [Photobacterium profundum 3TCK]...	9.0E-47	[2..141]	[8..149]
gi\|114770497 - gi\|114770497\|ref\|ZP_01447987.1\| (3R)-hydroxymyristol acyl carrier protein dehydratase [alpha proteob... gi\|221133304 - gi\|221133304\|ref\|ZP_03559609.1\| 3-hydroxymyristol acyl carrier protein dehydratase [Glaciecola sp. H... gi\|114548678, gi... - gi\|114770497\|ref\|ZP_01447987.1\| (3R)-hydroxymyristol acyl carrier protein dehydratase [alpha proteob...	1.0E-46	[2..141]	[8..147]

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Predicted Domain #1

Region A:
Residues: [1-144]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLDIQQIKEI IPHRYPFLLV DKVLEVEEGK RAIGIKNVTA NEEFFNGHFP DYPVMPGVLI  60
   61 VEALAQVGAV AMLKKEENRG RLAFFAGIDN CRFKRQVRPG DQLRLEVEMT RVRGAIGKGK 120
  121 AIATVDGEIA CETEITFALG DKKE

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	47.69897
Match:	1u1zA
Description:	The Structure of (3R)-hydroxyacyl-ACP dehydratase (FabZ)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
CoA hydrolase activity	1.75530090056705	bayes_pls_golite062009
catalytic activity	1.11649534052993	bayes_pls_golite062009
thiolester hydrolase activity	0.65794221902015	bayes_pls_golite062009
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity	0.57527342054578	bayes_pls_golite062009
3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity	0.57527342054578	bayes_pls_golite062009
acyl-CoA thioesterase activity	0.24094527143225	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: