YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|25520695, gi\|...
Organism:	Agrobacterium tumefaciens
Length:	297 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|25520695, gi|....

Description	E-value	Query Range	Subject Range
gi\|49179827, gi\|... - gi\|49185900\|ref\|YP_029152.1\| aminoglycoside phosphotransferase family protein [Bacillus anthracis st... gi\|254752430 - gi\|254752430\|ref\|ZP_05204466.1\| aminoglycoside phosphotransferase family protein [Bacillus anthracis... gi\|47528402, gi\|... - gi\|47528402\|ref\|YP_019751.1\| aminoglycoside phosphotransferase family protein [Bacillus anthracis st... gi\|254742714 - gi\|254742714\|ref\|ZP_05200399.1\| aminoglycoside phosphotransferase family protein [Bacillus anthracis... gi\|30257692, gi\|... - gi\|30263059\|ref\|NP_845436.1\| aminoglycoside phosphotransferase family protein [Bacillus anthracis st... gi\|254738113 - gi\|254738113\|ref\|ZP_05195816.1\| aminoglycoside phosphotransferase family protein [Bacillus anthracis... gi\|254723060 - gi\|254723060\|ref\|ZP_05184848.1\| aminoglycoside phosphotransferase family protein [Bacillus anthracis... gi\|254760947 - gi\|254760947\|ref\|ZP_05212971.1\| aminoglycoside phosphotransferase family protein [Bacillus anthracis... gi\|177650086, gi... - gi\|177650086\|ref\|ZP_02933087.1\| aminoglycoside phosphotransferase family protein [Bacillus anthracis... gi\|190564524, gi... - gi\|190564524\|ref\|ZP_03017445.1\| aminoglycoside phosphotransferase family protein [Bacillus anthracis... gi\|170684804, gi... - gi\|170684804\|ref\|ZP_02876029.1\| aminoglycoside phosphotransferase family protein [Bacillus anthracis... gi\|170705023, gi... - gi\|170705023\|ref\|ZP_02895488.1\| aminoglycoside phosphotransferase family protein [Bacillus anthracis... gi\|167532108, gi... - gi\|167631810\|ref\|ZP_02390137.1\| aminoglycoside phosphotransferase family protein [Bacillus anthracis... gi\|167637503, gi... - gi\|167637503\|ref\|ZP_02395783.1\| aminoglycoside phosphotransferase family protein [Bacillus anthracis... gi\|254685649 - gi\|254685649\|ref\|ZP_05149508.1\| aminoglycoside phosphotransferase family protein [Bacillus anthracis... gi\|165868790, gi... - gi\|165868790\|ref\|ZP_02213450.1\| aminoglycoside phosphotransferase family protein [Bacillus anthracis... gi\|229602714, gi... - gi\|229602714\|ref\|YP_002867329.1\| aminoglycoside phosphotransferase family protein [Bacillus anthraci... gi\|227814092, gi... - gi\|227814092\|ref\|YP_002814101.1\| aminoglycoside phosphotransferase family protein [Bacillus anthraci...	187.0	[0..7]	[294..4]
gi\|29604630, gi\|... - gi\|29827530\|ref\|NP_822164.1\| phosphotransferase [Streptomyces avermitilis MA-4680], gi\|29604630\|dbj\|...	185.0	[0..2]	[294..7]
gi\|21400988, gi\|... - gi\|65320367\|ref\|ZP_00393326.1\| COG3173: Predicted aminoglycoside phosphotransferase [Bacillus anthra...	184.0	[0..7]	[294..4]
gi\|49329548, gi\|... - gi\|49477992\|ref\|YP_037187.1\| phosphotransferase family protein [Bacillus thuringiensis serovar konku...	183.0	[0..7]	[294..4]
gi\|15075097 - gi\|15075097\|emb\|CAC46654.1\| Hypothetical protein [Sinorhizobium meliloti 1021] gi\|15965828 - gi\|15965828\|ref\|NP_386181.1\| hypothetical protein SMc04360 [Sinorhizobium meliloti 1021]	183.0	[0..5]	[294..7]
gi\|47558390, gi\|... - gi\|47564238\|ref\|ZP_00235283.1\| acetyltransferase [Bacillus cereus G9241], gi\|47558390\|gb\|EAL16713.1\|...	182.0	[0..7]	[294..4]
gi\|89156259, gi\|... - gi\|89205857\|ref\|ZP_01184423.1\| Aminoglycoside phosphotransferase [Bacillus weihenstephanensis KBAB4]...	182.0	[0..7]	[295..4]
gi\|30021192, gi\|... - gi\|30021192\|ref\|NP_832823.1\| acetyltransferase [Bacillus cereus ATCC 14579], gi\|29896746\|gb\|AAP10024... gi\|228637779, gi... - gi\|229145689\|ref\|ZP_04274071.1\| Aminoglycoside phosphotransferase [Bacillus cereus BDRD-ST24], gi\|22... gi\|228655276, gi... - gi\|229128417\|ref\|ZP_04257398.1\| Aminoglycoside phosphotransferase [Bacillus cereus BDRD-Cer4], gi\|22... gi\|228673029, gi... - gi\|229110545\|ref\|ZP_04240115.1\| Aminoglycoside phosphotransferase [Bacillus cereus Rock1-15], gi\|228...	180.0	[0..5]	[294..2]
gi\|53753376, gi\|... - gi\|54293544\|ref\|YP_125959.1\| hypothetical protein lpl0596 [Legionella pneumophila str. Lens], gi\|537...	179.0	[0..1]	[291..1]
gi\|52627907, gi\|... - gi\|52840796\|ref\|YP_094595.1\| aminoglycoside phosphotransferase [Legionella pneumophila subsp. pneumo...	178.0	[0..1]	[291..1]

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Predicted Domain #1

Region A:
Residues: [1-297]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDDRIVVTTQ QVRALIASQF PQWAALDVQP VDLSGWDNRS FRLGEDMLVR MPSAERYVAQ  60
   61 VEKEHRWLPE LGPLLPVPIP APLALGQPGE QYPFCWSVYR WLKGEPLARY LDSIELSAIA 120
  121 IDVAAFLKAL HGIDASAGPP AGAHNFHRGG SLAVYDGEAR ASAARLANEV DQALAMEIWQ 180
  181 LALSSHWQGK GVWVHGDIAE GNLLVQDGRL SAVIDFGSSG VGDPSSDLIL AWNVLDAHSR 240
  241 AVFRQALGLD EATWQRGRGW ALWKALIVLD AERGRNEKMA EWSRRTLREI FADHLEN

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	22.045757
Match:	1zylA
Description:	No description for 1zylA was found.

Predicted functions:

Term	Confidence	Notes
protein kinase activity	1.3154140242701	bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor	1.22869951697712	bayes_pls_golite062009
kinase activity	1.12837603902755	bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups	1.00935990325065	bayes_pls_golite062009
binding	0.85511487254537	bayes_pls_golite062009
catalytic activity	0.820562634281275	bayes_pls_golite062009
transferase activity	0.793030362112723	bayes_pls_golite062009
protein serine/threonine kinase activity	0.756667895757179	bayes_pls_golite062009
protein binding	0.254817929080362	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: