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View Structure Prediction Details

Protein: gi|54309850, gi|...
Organism: Photobacterium profundum SS9
Length: 231 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|54309850, gi|....

Description E-value Query
Range
Subject
Range
gi|24374670, gi|... - gi|24374670|ref|NP_718713.1| putative lipoprotein [Shewanella oneidensis MR-1], gi|24349312|gb|AAN56...
SO3157 - lipoprotein putative
344.0 [0..1] [231..1]

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Predicted Domain #1
Region A:
Residues: [1-231]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRIFQRFTLL TLTILLSAGI TGCSQKFNDV NDTLSLALFG DNDTEFANDD VQRLPYASLY  60
   61 AQVDDGPQAF MVLALAESAL SLTPNTRTQL KWVSSDKGML VTESGRLVKS LNLPQGNLID 120
  121 TYSNQPDPLI LGLHRASTPM HWQRSIDWQP GYHFDYQLTS RFARQDNAVI MINERPITTW 180
  181 HFVETVTIDV LDTSYKNQFW IDGKTGKVLK SQQKLAPGLP FIDMTLLKPY S

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Detection Method: PSI-BLAST
Confidence: 68.522879
Match: 2in5A
Description: No description for 2in5A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle