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View Structure Prediction Details

Protein: gi|54307978, gi|...
Organism: Photobacterium profundum SS9
Length: 280 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|54307978, gi|....

Description E-value Query
Range
Subject
Range
gi|77381356, gi|... - gi|77457353|ref|YP_346858.1| putative esterase [Pseudomonas fluorescens Pf0-1], gi|77381356|gb|ABA72...
237.0 [0..1] [279..1]

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Predicted Domain #1
Region A:
Residues: [1-280]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLENISSNK SFGGWNKQYT HRSTALNCNM RFAIFLPPQI VSGKKVPVLY WLSGLTCTDE  60
   61 NFMHKAGAQR LAAELGMAIV APDTSPRGDD VTDDADGSYD FGLGAGFYVN ATQAPFNRHY 120
  121 QMYDYVVNEL PDLIEANFPV TQQRAISGHS MGGHGALTIA LKNPARFSSV SAFSPIVNPM 180
  181 QCPWGQKAFT GYLGKDTEQW KAYDATELMK HTDARLPALV DQGDQDNFMV EQLKPEALVA 240
  241 VAESVGYPLE LRMQEGYDHS YFFIASFIED HLRFHAKHFA 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 42.69897
Match: 1pv1A
Description: Crystal Structure Analysis of Yeast Hypothetical Protein: YJG8_YEAST
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
S-formylglutathione hydrolase activity 2.11404818814754 bayes_pls_golite062009
hydrolase activity 1.75934962198703 bayes_pls_golite062009
catalytic activity 1.39629727416851 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 1.09488027320166 bayes_pls_golite062009
phospholipase activity 1.05835015160042 bayes_pls_golite062009
lipase activity 0.849473630399459 bayes_pls_golite062009
carboxylesterase activity 0.424330502936163 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle