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View Structure Prediction Details

Protein: gi|51891924, gi|...
Organism: Symbiobacterium thermophilum IAM 14863
Length: 257 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|51891924, gi|....

Description E-value Query
Range
Subject
Range
gi|52081724, gi|... - gi|52787110|ref|YP_092939.1| YutF [Bacillus licheniformis ATCC 14580], gi|52349612|gb|AAU42246.1| Yu...
170.0 [0..1] [254..1]

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Predicted Domain #1
Region A:
Residues: [1-257]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRYAGYVFD LDGTLYLGDH AIPGAPETLA ELRRRGARIA FLSNKPIEPA ASYAAKLNRL  60
   61 GIQAAVEEVI NSSIVMARYL SRTAPGARVY LIGEEPLAEE LRKRGIRIVA DPLDCEYVVV 120
  121 SWDRQFTYQK LNDALQAIRN GARFIATHPD RTCPVPGGEV ADVGGMIGAV EGVTGKKVEL 180
  181 ITGKPSPITV QEAMNLLGLP PDQCIMVGDR LETDMRMGRE AGMATALVLT GVTRREQVES 240
  241 SPWKPDYVLE SVRGLIG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 42.0
Match: 1vjrA
Description: Crystal structure of 4-nitrophenylphosphatase (TM1742) from Thermotoga maritima at 2.40 A resolution
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
phosphatase activity 5.67874236681937 bayes_pls_golite062009
phosphoric ester hydrolase activity 5.47006620187028 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 4.48428199248982 bayes_pls_golite062009
hydrolase activity 4.39056655921797 bayes_pls_golite062009
phosphoprotein phosphatase activity 3.46809320224801 bayes_pls_golite062009
catalytic activity 1.55296860681783 bayes_pls_golite062009
inorganic cation transmembrane transporter activity 1.21677981254341 bayes_pls_golite062009
protein serine/threonine phosphatase activity 0.704515064625628 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 0.525704827211584 bayes_pls_golite062009
binding 0.504752091326444 bayes_pls_golite062009
kinase activity 0.497538501078274 bayes_pls_golite062009
nucleic acid binding 0.437068552068699 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 0.381009626718837 bayes_pls_golite062009
cation transmembrane transporter activity 0.201233537100321 bayes_pls_golite062009
DNA binding 0.0915524013623013 bayes_pls_golite062009
protein tyrosine phosphatase activity 0.0550960879804855 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle