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View Structure Prediction Details

Protein: gi|52424791, gi|...
Organism: Mannheimia succiniciproducens MBEL55E
Length: 154 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|52424791, gi|....

Description E-value Query
Range
Subject
Range
gi|75437779, gi|... - gi|75437779|ref|ZP_00733503.1| acyl-CoA hydrolase [Actinobacillus succinogenes 130Z], gi|74275749|gb...
161.0 [0..1] [147..1]

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Predicted Domain #1
Region A:
Residues: [1-154]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDKTNIIRE PEGSLILRTL AMPSDTNANG DIFGGWIMSQ MDMGGAILAK EIGKGRVVTV  60
   61 CVDKMTFLRP ISVGDVVCCY GKLVKIGRSS MQVKVEVWIK KVYDGVRDRH CVTEALFTYV 120
  121 AIDKEGKPRA VPREDNPELE QALALLNNHT TEEN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 36.09691
Match: 1yliA
Description: Structure of HI0827, a thioesterase acting on short-chain acyl-CoA compounds
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
CoA hydrolase activity 1.66884012171138 bayes_pls_golite062009
thiolester hydrolase activity 0.78966333832473 bayes_pls_golite062009
catalytic activity 0.74605540351792 bayes_pls_golite062009
acyl-CoA thioesterase activity 0.302743904610747 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle