Protein: | BEE1_ARATH |
Organism: | Arabidopsis thaliana |
Length: | 260 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BEE1_ARATH.
Description | E-value | Query Range |
Subject Range |
|
172.0 | [0..15] | [260..909] |
Region A: Residues: [1-134] |
1 11 21 31 41 51 | | | | | | 1 MANFENLSSD FQTIAMDIYS SITQAADLNN NNSNLHFQTF HPSSTSLESL FLHHHQQQLL 60 61 HFPGNSPDSS NNFSSTSSFL HSDHNIVDET KKRKALLPTL SSSETSGVSD NTNVIATETG 120 121 SLRRGKRLKK KKEE |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [135-260] |
1 11 21 31 41 51 | | | | | | 1 EDEKEREVVH VRARRGQATD SHSLAERVRR GKINERLRCL QDMVPGCYKA MGMATMLDEI 60 61 INYVQSLQNQ VEFLSMKLTA ASSFYDFNSE TDAVDSMQRA KARETVEMGR QTRDGSPVFH 120 121 LSTWSL |
Detection Method: | ![]() |
Confidence: | 15.69897 |
Match: | 1nkpA |
Description: | Myc prot-oncogene protein |
Matching Structure (courtesy of the PDB):![]() |
Term | Confidence | Notes |
binding | 1.12507195426228 | bayes_pls_golite062009 |
nucleic acid binding | 0.43204604575196 | bayes_pls_golite062009 |
DNA binding | 0.40884226851256 | bayes_pls_golite062009 |
transcription regulator activity | 0.31759335140578 | bayes_pls_golite062009 |
transcription factor activity | 0.09721565916723 | bayes_pls_golite062009 |