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View Structure Prediction Details

Protein: CE37708
Organism: Caenorhabditis elegans
Length: 226 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE37708.

Description E-value Query
Range
Subject
Range
gi|110601528, gi... - gi|222054221|ref|YP_002536583.1| acetylornithine and succinylornithine aminotransferase [Geobacter s...
271.0 [0..19] [226..1]

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Predicted Domain #1
Region A:
Residues: [1-226]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSSLRRVVP SLPRGSRSLT SQQIFDREKK FGCHNYKPLP VALSKGEGCF VWDVEGKKYF  60
   61 DFLAAYSAVN QGHCHPKLLK VVQEQASTLT LTSRAFYNNV LGEYEEYVTK LFKYDKVLPM 120
  121 NTGVEACESA VKLARRWAYD VKGVKDNEAV VVFAENNFWG RSIAAISAST DPDSFARFGP 180
  181 FVPGFKTVPY NNLKTSRTLP RQRPARYCCT RKSAFWRILP SFCSAL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 65.69897
Match: 2byjA
Description: Ornithine aminotransferase mutant Y85I
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.76873005093488 bayes_pls_golite062009
transferase activity 0.3093369052482 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle