| Protein: | AGL93_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 289 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AGL93_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
217.0 | [0..9] | [289..424] |
|
|
207.0 | [0..14] | [259..1] |
|
|
206.0 | [0..14] | [259..1] |
|
|
203.0 | [0..14] | [259..1] |
|
|
202.0 | [0..14] | [259..1] |
|
|
202.0 | [0..14] | [259..1] |
|
|
202.0 | [0..14] | [259..1] |
|
|
202.0 | [0..14] | [259..1] |
|
|
201.0 | [0..14] | [259..1] |
|
Region A: Residues: [1-107] |
1 11 21 31 41 51
| | | | | |
1 MDSSMSTKKK TKLSVRNQTC FKKSSLSSSS TAKKTTNLSM REQTMFKKAL ELSTLCNIDV 60
61 CVIYYGRDGK LIKTWPDDQS KVRDMAERFS RLHERERCKK RTNLSLF
|
| Detection Method: |  |
| Confidence: | 19.69897 |
| Match: | 1tqeP |
| Description: | Mechanism of recruitment of class II histone deacetylases by myocyte enhancer factor-2 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [108-216] |
1 11 21 31 41 51
| | | | | |
1 LRKKILDDTK LSEKVLEMED SLESGLRVLQ DKLLLLQPEK NQTEFGQTRA VSSTTNPLSP 60
61 PPSLIEDHRH QQRTEPLMSG VSNTEQDLST SSLSQNQSKF SVFLYNHDN
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [217-289] |
1 11 21 31 41 51
| | | | | |
1 CSFYQVPDSV SSFDSLTSTG LLGEQGSGLG SSFDLPMVFP PQMQTQTPLV PFDQFAPWNQ 60
61 APSFADPMMF PYN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
