| Protein: | AGL93_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 289 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AGL93_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
217.0 | [0..9] | [289..424] |
|
|
207.0 | [0..14] | [259..1] |
|
|
206.0 | [0..14] | [259..1] |
|
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203.0 | [0..14] | [259..1] |
|
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202.0 | [0..14] | [259..1] |
|
|
202.0 | [0..14] | [259..1] |
|
|
202.0 | [0..14] | [259..1] |
|
|
202.0 | [0..14] | [259..1] |
|
|
201.0 | [0..14] | [259..1] |
|
Region A: Residues: [1-107] |
1 11 21 31 41 51
| | | | | |
1 MDSSMSTKKK TKLSVRNQTC FKKSSLSSSS TAKKTTNLSM REQTMFKKAL ELSTLCNIDV 60
61 CVIYYGRDGK LIKTWPDDQS KVRDMAERFS RLHERERCKK RTNLSLF
|
| Detection Method: |  |
| Confidence: | 19.69897 |
| Match: | 1tqeP |
| Description: | Mechanism of recruitment of class II histone deacetylases by myocyte enhancer factor-2 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [108-216] |
1 11 21 31 41 51
| | | | | |
1 LRKKILDDTK LSEKVLEMED SLESGLRVLQ DKLLLLQPEK NQTEFGQTRA VSSTTNPLSP 60
61 PPSLIEDHRH QQRTEPLMSG VSNTEQDLST SSLSQNQSKF SVFLYNHDN
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.445 | N/A | N/A | a.29.12 | Description not found. |
| View | Download | 0.394 | N/A | N/A | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.391 | N/A | N/A | a.39.1 | EF-hand |
| View | Download | 0.367 | N/A | N/A | a.280.1 | Description not found. |
| View | Download | 0.363 | N/A | N/A | a.22.1 | Histone-fold |
| View | Download | 0.363 | N/A | N/A | a.22.1 | Histone-fold |
| View | Download | 0.363 | N/A | N/A | a.36.1 | Signal peptide-binding domain |
| View | Download | 0.363 | N/A | N/A | a.36.1 | Signal peptide-binding domain |
| View | Download | 0.325 | N/A | N/A | d.108.1 | Acyl-CoA N-acyltransferases (Nat) |
| View | Download | 0.261 | N/A | N/A | a.60.10 | Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain |
| View | Download | 0.243 | N/A | N/A | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
|
Region A: Residues: [217-289] |
1 11 21 31 41 51
| | | | | |
1 CSFYQVPDSV SSFDSLTSTG LLGEQGSGLG SSFDLPMVFP PQMQTQTPLV PFDQFAPWNQ 60
61 APSFADPMMF PYN
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.565 | a.5.3 | N-terminal domain of phosphatidylinositol transfer protein sec14p |
| View | Download | 0.494 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.494 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.481 | a.4.1 | Homeodomain-like |
| View | Download | 0.430 | a.4.1 | Homeodomain-like |
| View | Download | 0.398 | a.4.1 | Homeodomain-like |
| View | Download | 0.386 | a.4.1 | Homeodomain-like |
| View | Download | 0.346 | a.4.1 | Homeodomain-like |
| View | Download | 0.281 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.234 | g.3.7 | Scorpion toxin-like |
