YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|7471441
Organism:	Deinococcus radiodurans
Length:	222 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7471441.

Description	E-value	Query Range	Subject Range
gi\|15891126, gi\|... - gi\|15891126\|ref\|NP_356798.1\| acyl-CoA hydrolase [Agrobacterium tumefaciens str. C58], gi\|15159470\|gb... gi\|25520486 - pir\|\|E98257 hypothetical protein AGR_L_2016 [imported] - Agrobacterium tumefaciens (strain C58, Cere...	1.0E-37	[11..203]	[72..262]
BACH_RAT - (Q64559) Cytosolic acyl coenzyme A thioester hydrolase (EC 3.1.2.2) (Long chain acyl-CoA thioester h...	3.0E-37	[44..221]	[146..320]
gi\|74214478 - gi\|74214478\|dbj\|BAE31092.1\| unnamed protein product [Mus musculus]	4.0E-37	[44..221]	[146..320]
gi\|86142718, gi\|... - gi\|86142718\|ref\|ZP_01061157.1\| acyl CoA thioester hydrolase family protein [Flavobacterium sp. MED21... gi\|86142718, gi\|... - gi\|86142718\|ref\|ZP_01061157.1\| acyl CoA thioester hydrolase family protein [Flavobacterium sp. MED21...	7.0E-37	[78..217]	[1..140]

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Predicted Domain #1

Region A:
Residues: [1-222]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVRVCCHAP PGVSNHLFTF CAGNLTTGFS GGSVTSQKGG AAGLPTCSRR CPRGCLPGSD  60
   61 PLPRHPRRYA PPVTPPVTPP TTPAPRSRAR MLELVFPKDT NYHGTAFGGW VLALMDKAAS 120
  121 VAAVRHAGGN VVTARMDGVD FHVPIRVGDA VALDARVIRV GRSSMTIRVD VYRENMASGE 180
  181 QQLATGGLFT FVALGEDGKP RPVPPLPEGS TDSEQPDYEA RP

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Detection Method:	PSI-BLAST
Confidence:	39.39794
Match:	2gvhA
Description:	No description for 2gvhA was found.

Predicted functions:

Term	Confidence	Notes
CoA hydrolase activity	1.75530090056705	bayes_pls_golite062009
catalytic activity	1.11649534052993	bayes_pls_golite062009
thiolester hydrolase activity	0.65794221902015	bayes_pls_golite062009
acyl-CoA thioesterase activity	0.24094527143225	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: