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View Structure Prediction Details

Protein: gi|51246152, gi|...
Organism: Desulfotalea psychrophila LSv54
Length: 231 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|51246152, gi|....

Description E-value Query
Range
Subject
Range
gi|82742353, gi|... - gi|82742353|ref|ZP_00905049.1| NonF-related protein [Shewanella sp. W3-18-1], gi|82720311|gb|EAP5518...
gi|124545881, gi... - gi|124545881|ref|ZP_01705031.1| ThiJ/PfpI [Shewanella putrefaciens 200], gi|124510484|gb|EAY54553.1|...
206.0 [0..1] [226..3]

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Predicted Domain #1
Region A:
Residues: [1-231]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFLMVLTSH DRLGDTGGKT GFWLEEFVAP YYLFKDAGVE ITLASPRGGQ PPLDPKSDKP  60
   61 SRQTEAAGRF RADIDAQTAL ANTLKLSDID PDNFDAVFYP GGHGPLWDLA EDRHSIALIE 120
  121 SIYAAGKPVA AVCHGPAVLR HARTPAGEPL VKGKSVTGFS NSEENAGQLS EIVPFLVETD 180
  181 LKSKGANYSK ADDWQAHVIT DGNLITGQNP ASSELTAKAL LERSQVIFLG A

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Detection Method: PSI-BLAST
Confidence: 41.69897
Match: 1u9cA
Description: Crystallographic structure of APC35852
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
peptidase activity 1.80707559478053 bayes_pls_golite062009
catalytic activity 1.30391542469987 bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides 1.25093570977842 bayes_pls_golite062009
hydrolase activity 1.1936316102151 bayes_pls_golite062009
ligase activity 1.03859358394018 bayes_pls_golite062009
binding 0.534753981515262 bayes_pls_golite062009
nucleic acid binding 0.3972868364469 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle