YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30265359, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	285 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30265359, gi|....

Description	E-value	Query Range	Subject Range
gi\|56381763, gi\|... - gi\|56421921\|ref\|YP_149239.1\| fructose-bisphosphate aldolase [Geobacillus kaustophilus HTA426], gi\|56... gi\|229497815, gi... - gi\|229497815\|ref\|ZP_04391514.1\| fructose-1,6-bisphosphate aldolase, class II [Geobacillus sp. Y412MC... gi\|221087046, gi... - gi\|221087046\|ref\|ZP_03556586.1\| fructose-1,6-bisphosphate aldolase, class II [Geobacillus sp. Y412MC...	0.0	[1..285]	[1..285]
ALF_GEOSE - Fructose-bisphosphate aldolase OS=Geobacillus stearothermophilus GN=fba PE=3 SV=3	0.0	[1..285]	[1..285]
gi\|152977521, gi... - gi\|89201426\|ref\|ZP_01180166.1\| Ketose-bisphosphate aldolase, class-II:Fructose-1,6-bisphosphate aldo...	0.0	[1..285]	[1..285]
gi\|52350140, gi\|... - gi\|52787638\|ref\|YP_093467.1\| fructose-bisphosphate aldolase [Bacillus licheniformis ATCC 14580], gi\|...	0.0	[1..285]	[1..285]
gi\|30023366, gi\|... - gi\|30023366\|ref\|NP_834997.1\| fructose-bisphosphate aldolase [Bacillus cereus ATCC 14579], gi\|2989892... gi\|229051006, gi... - gi\|229051006\|ref\|ZP_04194554.1\| Fructose-bisphosphate aldolase [Bacillus cereus AH676], gi\|228722315... gi\|228798081, gi... - gi\|228961599\|ref\|ZP_04123208.1\| Fructose-bisphosphate aldolase [Bacillus thuringiensis serovar pakis... gi\|206734698, gi... - gi\|206970121\|ref\|ZP_03231074.1\| fructose-bisphosphate aldolase, class II [Bacillus cereus AH1134], g... gi\|228955583, gi... - gi\|228955583\|ref\|ZP_04117584.1\| Fructose-bisphosphate aldolase [Bacillus thuringiensis serovar kurst... gi\|218163861, gi... - gi\|218235904\|ref\|YP_002370112.1\| fructose-bisphosphate aldolase, class II [Bacillus cereus B4264], g... gi\|228652923, gi... - gi\|229130584\|ref\|ZP_04259540.1\| Fructose-bisphosphate aldolase [Bacillus cereus BDRD-Cer4], gi\|22865... gi\|229112748, gi... - gi\|229112748\|ref\|ZP_04242281.1\| Fructose-bisphosphate aldolase [Bacillus cereus Rock1-15], gi\|228670... gi\|229082549, gi... - gi\|229082549\|ref\|ZP_04215012.1\| Fructose-bisphosphate aldolase [Bacillus cereus Rock4-2], gi\|2287009... gi\|229072802, gi... - gi\|229072802\|ref\|ZP_04206001.1\| Fructose-bisphosphate aldolase [Bacillus cereus F65185], gi\|22871029... gi\|228601780, gi... - gi\|229181584\|ref\|ZP_04308909.1\| Fructose-bisphosphate aldolase [Bacillus cereus 172560W], gi\|2286017... gi\|229153498, gi... - gi\|229153498\|ref\|ZP_04281676.1\| Fructose-bisphosphate aldolase [Bacillus cereus m1550], gi\|228630102... gi\|228635525, gi... - gi\|229147875\|ref\|ZP_04276216.1\| Fructose-bisphosphate aldolase [Bacillus cereus BDRD-ST24], gi\|22863...	0.0	[1..285]	[1..285]
ALF_BACSU, ALF1_... - Probable fructose-bisphosphate aldolase OS=Bacillus subtilis GN=fbaA PE=1 SV=2, Probable fructose-bi... gi\|221316001 - gi\|221316001\|ref\|ZP_03597806.1\| fructose-bisphosphate aldolase [Bacillus subtilis subsp. subtilis st... gi\|221320912 - gi\|221320912\|ref\|ZP_03602206.1\| fructose-bisphosphate aldolase [Bacillus subtilis subsp. subtilis st... gi\|221325196 - gi\|221325196\|ref\|ZP_03606490.1\| fructose-bisphosphate aldolase [Bacillus subtilis subsp. subtilis st... ALF_BACSU - Probable fructose-bisphosphate aldolase OS=Bacillus subtilis (strain 168) GN=fbaA PE=1 SV=2	0.0	[1..285]	[1..285]
gi\|51973696, gi\|... - gi\|52140227\|ref\|YP_086604.1\| fructose-bisphosphate aldolase [Bacillus cereus E33L], gi\|51973696\|gb\|A...	0.0	[1..285]	[1..285]
ALF2_STAEQ - Fructose-bisphosphate aldolase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=fba PE=3... gi\|242241531, gi... - gi\|242241531\|ref\|ZP_04795976.1\| fructose-bisphosphate aldolase [Staphylococcus epidermidis W23144], ... ALF2_STAES - Fructose-bisphosphate aldolase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=fba PE=3 SV=1 ALF2_STAEP - (Q8CNI3) Fructose-bisphosphate aldolase (EC 4.1.2.13) gi\|251812166, gi... - gi\|251812166\|ref\|ZP_04826639.1\| fructose-bisphosphate aldolase [Staphylococcus epidermidis BCM-HMP00...	0.0	[1..285]	[1..285]
gi\|228746854, gi... - gi\|229014504\|ref\|ZP_04171622.1\| Fructose-bisphosphate aldolase [Bacillus mycoides DSM 2048], gi\|2287... gi\|89205885, gi\|... - gi\|89205885\|ref\|ZP_01184450.1\| Ketose-bisphosphate aldolase, class-II:Fructose-1,6-bisphosphate aldo... gi\|229170044, gi... - gi\|229170044\|ref\|ZP_04297735.1\| Fructose-bisphosphate aldolase [Bacillus cereus AH621], gi\|228613391... gi\|229136154, gi... - gi\|229136154\|ref\|ZP_04264907.1\| Fructose-bisphosphate aldolase [Bacillus cereus BDRD-ST196], gi\|2286...	0.0	[1..285]	[1..285]
gi\|41057054, gi\|... - gi\|41057054\|ref\|NP_957657.1\| putative class II fructose-1,6-bisphosphate aldolase [Bacillus methanol...	0.0	[1..285]	[1..284]

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Predicted Domain #1

Region A:
Residues: [1-285]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLVSMKEML NKALEGKYAV GQFNMNNLEW TQAILAAAEE EKSPVILGVS EGAARHMTGF  60
   61 KTVVAMVKAL IEEMNITVPV AIHLDHGSSF EKCKEAIDAG FTSVMIDASH HPFEENVETT 120
  121 KKVVEYAHAR NVSVEAELGT VGGQEDDVIA EGVIYADPAE CKHLVEATGI DCLAPALGSV 180
  181 HGPYKGEPNL GFAEMEQVRD FTGVPLVLHG GTGIPTADIE KAISLGTSKI NVNTENQIEF 240
  241 TKAVREVLNK DQEVYDPRKF IGPGRDAIKA TVIGKIREFG SNGKA

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	100.0
Match:	1gvfA
Description:	Tagatose-1,6-bisphosphate aldolase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	2.67031204377352	bayes_pls_golite062009
fructose-bisphosphate aldolase activity	2.5119145652386	bayes_pls_golite062009
transferase activity, transferring aldehyde or ketonic groups	2.0240718059985	bayes_pls_golite062009
transaldolase activity	1.66628808988861	bayes_pls_golite062009
binding	1.1388634428163	bayes_pls_golite062009
lyase activity	0.740424046054758	bayes_pls_golite062009
transferase activity	0.464721888799972	bayes_pls_golite062009
aldehyde-lyase activity	0.351872954170322	bayes_pls_golite062009
monovalent inorganic cation transmembrane transporter activity	0.25728790872659	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: