YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30264171, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	183 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30264171, gi|....

Description	E-value	Query Range	Subject Range
gi\|34498373, gi\|... - gi\|34498373\|ref\|NP_902588.1\| ribosomal protein N-acetyltransferase [Chromobacterium violaceum ATCC 1...	3.0E-32	[1..183]	[1..188]
gi\|52784100, gi\|... - gi\|52784100\|ref\|YP_089929.1\| YnaD [Bacillus licheniformis ATCC 14580], gi\|52346602\|gb\|AAU39236.1\| Yn...	3.0E-32	[10..182]	[2..172]
YP20_BACLI - Uncharacterized N-acetyltransferase p20 OS=Bacillus licheniformis GN=p20 PE=3 SV=1	5.0E-32	[10..182]	[2..172]
gi\|74489536, gi\|... - gi\|75762974\|ref\|ZP_00742772.1\| Acetyltransferase, GNAT family [Bacillus thuringiensis serovar israel... gi\|228902605, gi... - gi\|228902605\|ref\|ZP_04066756.1\| Acetyltransferase, GNAT [Bacillus thuringiensis IBL 4222], gi\|228857... gi\|228792499, gi... - gi\|228967130\|ref\|ZP_04128166.1\| Acetyltransferase, GNAT [Bacillus thuringiensis serovar sotto str. T... gi\|218899256, gi... - gi\|218899256\|ref\|YP_002447667.1\| acetyltransferase, GNAT family [Bacillus cereus G9842], gi\|21854078...	2.0E-31	[1..183]	[1..183]
gi\|228603122, gi... - gi\|229180375\|ref\|ZP_04307718.1\| Acetyltransferase, GNAT [Bacillus cereus 172560W], gi\|228603122\|gb\|E... gi\|229152296, gi... - gi\|229152296\|ref\|ZP_04280489.1\| Acetyltransferase, GNAT [Bacillus cereus m1550], gi\|228631258\|gb\|EEK... gi\|229146670, gi... - gi\|229146670\|ref\|ZP_04275037.1\| Acetyltransferase, GNAT [Bacillus cereus BDRD-ST24], gi\|228636840\|gb... gi\|228653979, gi... - gi\|229129374\|ref\|ZP_04258345.1\| Acetyltransferase, GNAT [Bacillus cereus BDRD-Cer4], gi\|228653979\|gb... gi\|229192307, gi... - gi\|229192307\|ref\|ZP_04319272.1\| Acetyltransferase, GNAT [Bacillus cereus ATCC 10876], gi\|228591257\|g... gi\|30022180, gi\|... - gi\|30022180\|ref\|NP_833811.1\| ribosomal-protein-serine acetyltransferase [Bacillus cereus ATCC 14579]... gi\|228701974, gi... - gi\|229081352\|ref\|ZP_04213855.1\| Acetyltransferase, GNAT [Bacillus cereus Rock4-2], gi\|228701974\|gb\|E... gi\|229071600, gi... - gi\|229071600\|ref\|ZP_04204818.1\| Acetyltransferase, GNAT [Bacillus cereus F65185], gi\|228711536\|gb\|EE... gi\|228922845, gi... - gi\|228922845\|ref\|ZP_04086143.1\| Acetyltransferase, GNAT [Bacillus thuringiensis serovar huazhongensi... gi\|228849760, gi... - gi\|228909925\|ref\|ZP_04073746.1\| Acetyltransferase, GNAT [Bacillus thuringiensis IBL 200], gi\|2288497...	2.0E-31	[1..183]	[1..183]
gi\|167040456, gi... - gi\|167040456\|ref\|YP_001663441.1\| GCN5-related N-acetyltransferase [Thermoanaerobacter sp. X514], gi\|... gi\|255339225, gi... - gi\|255339225\|ref\|ZP_05380065.1\| GCN5-related N-acetyltransferase [Thermoanaerobacter mathranii subsp... gi\|242256373, gi... - gi\|242256373\|ref\|ZP_04801265.1\| GCN5-related N-acetyltransferase [Thermoanaerobacter sp. X513], gi\|2...	3.0E-31	[4..182]	[1..177]
gi\|20516549, gi\|... - gi\|20807976\|ref\|NP_623147.1\| acetyltransferase [Thermoanaerobacter tengcongensis MB4], gi\|20516549\|g... gi\|20807976 - gi\|20807976\|ref\|NP_623147.1\| Acetyltransferase, including N-acetylase of ribosomal proteins [Thermoa...	1.0E-30	[6..182]	[1..175]
gi\|71367895, gi\|... - gi\|71367895\|ref\|ZP_00658409.1\| GCN5-related N-acetyltransferase [Nocardioides sp. JS614], gi\|7115636...	2.0E-30	[1..182]	[1..179]
gi\|229198218, gi... - gi\|229198218\|ref\|ZP_04324926.1\| Acetyltransferase, GNAT [Bacillus cereus m1293], gi\|228585237\|gb\|EEK... gi\|228597134, gi... - gi\|229186340\|ref\|ZP_04313505.1\| Acetyltransferase, GNAT [Bacillus cereus BGSC 6E1], gi\|228597134\|gb\|... gi\|228625636, gi... - gi\|229157679\|ref\|ZP_04285754.1\| Acetyltransferase, GNAT [Bacillus cereus ATCC 4342], gi\|228625636\|gb... gi\|229140830, gi... - gi\|229140830\|ref\|ZP_04269375.1\| Acetyltransferase, GNAT [Bacillus cereus BDRD-ST26], gi\|228642620\|gb... gi\|217066574, gi... - gi\|217961587\|ref\|YP_002340157.1\| acetyltransferase, GNAT family [Bacillus cereus AH187], gi\|21706657... gi\|206976282, gi... - gi\|206976282\|ref\|ZP_03237190.1\| acetyltransferase, GNAT family [Bacillus cereus H3081.97], gi\|206745... gi\|42783208, gi\|... - gi\|42783208\|ref\|NP_980455.1\| acetyltransferase [Bacillus cereus ATCC 10987], gi\|42739136\|gb\|AAS43063... gi\|51974867, gi\|... - gi\|52141398\|ref\|YP_085430.1\| acetyltransferase [Bacillus cereus E33L], gi\|51974867\|gb\|AAU16417.1\| ac...	2.0E-30	[1..183]	[1..183]

Back

Predicted Domain #1

Region A:
Residues: [1-183]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKPLLLDFPT LFQTERLQVR KPFPGDGAEV YEAIQASLED LVPWMPINAE TEESAEEIVR  60
   61 NAHGQFLLRE TLDFHLYDKV SGTFIGAITL KPENWDIPKF SLHFWLHSAY TKQGYMTEAV 120
  121 KGAIQFAFDK LSARRIEIRI DATNTNACKL AERLEFILEG TMENDFIAPD GSLRDARVYA 180
  181 KIN

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	25.69897
Match:	2fckA
Description:	Structure of a putative ribosomal-protein-serine acetyltransferase from Vibrio cholerae.
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
transferase activity	3.07496754543916	bayes_pls_golite062009
catalytic activity	2.34977492703662	bayes_pls_golite062009
N-acyltransferase activity	1.91035411578927	bayes_pls_golite062009
transferase activity, transferring acyl groups	1.75772333794819	bayes_pls_golite062009
transferase activity, transferring acyl groups other than amino-acyl groups	1.63399963366073	bayes_pls_golite062009
N-acetyltransferase activity	1.63227074632482	bayes_pls_golite062009
acyltransferase activity	1.60091210227059	bayes_pls_golite062009
acetyltransferase activity	1.12147423121182	bayes_pls_golite062009
histone acetyltransferase activity	0.28952428441599	bayes_pls_golite062009
lysine N-acetyltransferase activity	0.28952428441599	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: