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View Structure Prediction Details

Protein: gi|30265163, gi|...
Organism: Bacillus anthracis str. Ames
Length: 251 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30265163, gi|....

Description E-value Query
Range
Subject
Range
gi|109505678 - gi|109505678|ref|XP_001064421.1| PREDICTED: similar to triosephosphate isomerase [Rattus norvegicus]
1.0E-94 [2..251] [5..249]
TPI1 - triosephosphate isomerase 1
TPIS_PANTR - Triosephosphate isomerase OS=Pan troglodytes GN=TPI1 PE=2 SV=2
gi|123993147, gi... - gi|124000137|gb|ABM87577.1| triosephosphate isomerase 1 [synthetic construct], gi|123993147|gb|ABM84...
2.0E-93 [2..251] [5..249]
gi|223374 - gi|223374|prf||0801190A isomerase,triosephosphate
TPIS_RABIT - Triosephosphate isomerase OS=Oryctolagus cuniculus GN=TPI1 PE=1 SV=1
2.0E-93 [2..251] [4..248]

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Predicted Domain #1
Region A:
Residues: [1-251]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKPIIAGNW KMNKTLSEAV SFVEEVKGQI PAASAVDAVV CSPALFLERL VAATEGTDLQ  60
   61 VGAQNMHFEK NGAFTGEISP VALSDLKVGY VVLGHSERRE MFAETDESVN KKTIAAFEHG 120
  121 LTPIVCCGET LEERESGKTF DLVAGQVTKA LAGLTEEQVK ATVIAYEPIW AIGTGKSSSS 180
  181 ADANEVCAHI RKVVAEVVSP AAAEAVRIQY GGSVKPENIK EYMAQSDIDG ALVGGASLEP 240
  241 ASFLGLLGAV K

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 86.0
Match: 2btmA
Description: Triosephosphate isomerase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
triose-phosphate isomerase activity 5.94525596131351 bayes_pls_golite062009
intramolecular oxidoreductase activity 4.11751506069887 bayes_pls_golite062009
intramolecular oxidoreductase activity, interconverting aldoses and ketoses 3.62219160185043 bayes_pls_golite062009
isomerase activity 2.06271139232842 bayes_pls_golite062009
binding 1.80264931081179 bayes_pls_golite062009
catalytic activity 1.7524198174984 bayes_pls_golite062009
protein binding 0.33788557654084 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
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