YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30262914, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	390 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30262914, gi|....

Description	E-value	Query Range	Subject Range
gi\|228901486, gi... - gi\|228901486\|ref\|ZP_04065671.1\| Chorismate synthase [Bacillus thuringiensis IBL 4222], gi\|228858194\|... gi\|228965892, gi... - gi\|228965892\|ref\|ZP_04126966.1\| Chorismate synthase [Bacillus thuringiensis serovar sotto str. T0400... gi\|218898025, gi... - gi\|218898025\|ref\|YP_002446436.1\| chorismate synthase [Bacillus cereus G9842], gi\|218544547\|gb\|ACK969... gi\|74491476, gi\|... - gi\|75761043\|ref\|ZP_00741044.1\| Chorismate synthase [Bacillus thuringiensis serovar israelensis ATCC ...	0.0	[1..390]	[1..390]
gi\|228800555, gi... - gi\|228959166\|ref\|ZP_04120865.1\| Chorismate synthase [Bacillus thuringiensis serovar pakistani str. T... gi\|228632373, gi... - gi\|229151159\|ref\|ZP_04279366.1\| Chorismate synthase [Bacillus cereus m1550], gi\|228632373\|gb\|EEK8899... AROC2_BACCR - Chorismate synthase 2 OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 / NBRC 15305 / NCIMB... gi\|228637991, gi... - gi\|229145538\|ref\|ZP_04273922.1\| Chorismate synthase [Bacillus cereus BDRD-ST24], gi\|228637991\|gb\|EEK... gi\|228655145, gi... - gi\|229128286\|ref\|ZP_04257267.1\| Chorismate synthase [Bacillus cereus BDRD-Cer4], gi\|228655145\|gb\|EEL...	0.0	[1..390]	[1..390]
gi\|47568770, gi\|... - gi\|47568770\|ref\|ZP_00239465.1\| chorismate synthase [Bacillus cereus G9241], gi\|47554550\|gb\|EAL12906....	0.0	[1..390]	[1..390]
AROC2_BACC1 - Chorismate synthase 2 OS=Bacillus cereus (strain ATCC 10987 / NRS 248) GN=aroC2 PE=3 SV=1	0.0	[1..390]	[1..390]
AROC2_BACCZ - Chorismate synthase 2 OS=Bacillus cereus (strain ZK / E33L) GN=aroC2 PE=3 SV=1	0.0	[1..390]	[1..390]
gi\|195994779, gi... - gi\|196032028\|ref\|ZP_03099442.1\| chorismate synthase [Bacillus cereus W], gi\|195994779\|gb\|EDX58733.1\|... AROC2_BACHK - Chorismate synthase 2 OS=Bacillus thuringiensis subsp. konkukian GN=aroC2 PE=3 SV=1 AROC2_BACHK - Chorismate synthase 2 OS=Bacillus thuringiensis subsp. konkukian (strain 97-27) GN=aroC2 PE=3 SV=1	0.0	[1..390]	[1..390]
gi\|89153981, gi\|... - gi\|89208084\|ref\|ZP_01186606.1\| Chorismate synthase [Bacillus weihenstephanensis KBAB4], gi\|89153981\|...	0.0	[1..390]	[1..390]
gi\|37680618, gi\|... - gi\|37680618\|ref\|NP_935227.1\| chorismate synthase [Vibrio vulnificus YJ016], gi\|37199366\|dbj\|BAC95198...	0.0	[2..372]	[27..368]
gi\|48824372 - ref\|ZP_00285756.1\| COG0082: Chorismate synthase [Enterococcus faecium] gi\|68194611, gi\|... - gi\|69247996\|ref\|ZP_00604577.1\| Chorismate synthase [Enterococcus faecium DO], gi\|68194611\|gb\|EAN0910...	0.0	[1..390]	[1..388]
AROC_VIBPA - Chorismate synthase OS=Vibrio parahaemolyticus GN=aroC PE=3 SV=1 AROC_VIBPA - Chorismate synthase OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) GN=aroC PE=3 SV=...	0.0	[2..372]	[11..352]

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Predicted Domain #1

Region A:
Residues: [1-390]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRYITAGESH GPQLTVILEG VPAGLTLAAE HINKELLRRQ KGHGRGRRMQ IEMDTVEIVS  60
   61 GVRHGMTLGS PITLIVKNDD FKHWTKVMGA EPISEKESKE MKRTITKPRP GHADLNGAIK 120
  121 YGHRDIRNVL ERSSARETTV RVAAGAVAKQ ILKELGVEIA GHVLEIGGVK AKHISNLSIE 180
  181 EIQIITENSP VRCLDKTVEQ EMMDAIDNAK SSGDSIGGIV EVIAEGMPIG VGSYVHYDRK 240
  241 LDAKLAGAIM SINAFKGAEI GVGFEAARQP GSKVHDEILW DEEQGYTRKT NNAGGLEGGM 300
  301 TTGMPIVVRG VMKPIPTLYK PLASVDIDTK EAFQASIERS DSCAVPAAGV VAESVVAWEL 360
  361 AHALVEQFGK DRMELIQQNI TQHNKYAKEF

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	145.0
Match:	1q1lA
Description:	Crystal Structure of Chorismate Synthase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
chorismate synthase activity	5.15976990017342	bayes_pls_golite062009
carbon-oxygen lyase activity, acting on phosphates	4.26558071446785	bayes_pls_golite062009
catalytic activity	1.94308403509017	bayes_pls_golite062009
carbon-oxygen lyase activity	1.59965915025616	bayes_pls_golite062009
lyase activity	1.53765291169529	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: