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View Structure Prediction Details

Protein: gi|30257453, gi|...
Organism: Bacillus anthracis str. Ames
Length: 143 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30257453, gi|....

Description E-value Query
Range
Subject
Range
gi|108998740 - gi|108998740|ref|XP_001096632.1| PREDICTED: similar to cytidine deaminase [Macaca mulatta]
1.0E-35 [12..141] [16..140]
gi|38492430, gi|... - gi|38492431|pdb|1MQ0|B Chain B, Crystal Structure Of Human Cytidine Deaminase, gi|38492430|pdb|1MQ0|...
2.0E-35 [12..141] [10..134]
gi|158140485, gi... - gi|158320286|ref|YP_001512793.1| cytidine deaminase [Alkaliphilus oremlandii OhILAs], gi|158140485|g...
2.0E-34 [11..141] [3..127]
CDD_MOUSE - Cytidine deaminase OS=Mus musculus GN=Cda PE=1 SV=2
2.0E-34 [9..141] [13..140]
gi|76639480 - gi|76639480|ref|XP_873476.1| PREDICTED: similar to cytidine deaminase [Bos taurus]
2.0E-34 [12..141] [63..187]
gi|77995157, gi|... - gi|78043042|ref|YP_360385.1| cytidine deaminase [Carboxydothermus hydrogenoformans Z-2901], gi|77995...
4.0E-34 [7..143] [1..130]
cdd-1 - cytidine deaminase status:Confirmed UniProt:Q22922 protein_id:AAB04993.1
4.0E-34 [2..141] [3..136]

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Predicted Domain #1
Region A:
Residues: [1-143]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLQVIPLNSE DYDLIKAAEK VIEKNYKYGR HHIGSAVRTK TGNIYAAVHV EANVGRITVC  60
   61 GEAMAIGKSI SEGDHEFDTI VAVAHPHPHE DIEKCWVVAP CGMCRELISD YGKNTNVILS 120
  121 YNDELVKCNV MELLPEKYTS EVE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 36.69897
Match: 1mq0A
Description: Crystal Structure of Human Cytidine Deaminase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
cytidine deaminase activity 4.42667374679603 bayes_pls_golite062009
deaminase activity 2.76997916054448 bayes_pls_golite062009
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines 2.27736397496642 bayes_pls_golite062009
catalytic activity 1.70756445127105 bayes_pls_golite062009
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds 1.51294035758003 bayes_pls_golite062009
phosphoribosylaminoimidazolecarboxamide formyltransferase activity 0.827438033765078 bayes_pls_golite062009
IMP cyclohydrolase activity 0.34666532377291 bayes_pls_golite062009
hydrolase activity 0.339145951258927 bayes_pls_golite062009
cyclohydrolase activity 0.308525511259279 bayes_pls_golite062009
binding 0.255962198799579 bayes_pls_golite062009
hydroxymethyl-, formyl- and related transferase activity 0.1546696349714 bayes_pls_golite062009

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