YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30257142, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	281 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30257142, gi|....

Description	E-value	Query Range	Subject Range
ALF_GEOSE - Fructose-bisphosphate aldolase OS=Geobacillus stearothermophilus GN=fba PE=3 SV=3	0.0	[1..281]	[1..285]
gi\|56381763, gi\|... - gi\|56421921\|ref\|YP_149239.1\| fructose-bisphosphate aldolase [Geobacillus kaustophilus HTA426], gi\|56... gi\|229497815, gi... - gi\|229497815\|ref\|ZP_04391514.1\| fructose-1,6-bisphosphate aldolase, class II [Geobacillus sp. Y412MC... gi\|221087046, gi... - gi\|221087046\|ref\|ZP_03556586.1\| fructose-1,6-bisphosphate aldolase, class II [Geobacillus sp. Y412MC...	0.0	[1..281]	[1..285]
gi\|52350140, gi\|... - gi\|52787638\|ref\|YP_093467.1\| fructose-bisphosphate aldolase [Bacillus licheniformis ATCC 14580], gi\|...	0.0	[1..281]	[1..285]
gi\|152977521, gi... - gi\|89201426\|ref\|ZP_01180166.1\| Ketose-bisphosphate aldolase, class-II:Fructose-1,6-bisphosphate aldo...	0.0	[1..281]	[1..285]
ALF2_STAEQ - Fructose-bisphosphate aldolase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=fba PE=3... gi\|242241531, gi... - gi\|242241531\|ref\|ZP_04795976.1\| fructose-bisphosphate aldolase [Staphylococcus epidermidis W23144], ... ALF2_STAES - Fructose-bisphosphate aldolase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=fba PE=3 SV=1 ALF2_STAEP - (Q8CNI3) Fructose-bisphosphate aldolase (EC 4.1.2.13) gi\|251812166, gi... - gi\|251812166\|ref\|ZP_04826639.1\| fructose-bisphosphate aldolase [Staphylococcus epidermidis BCM-HMP00...	0.0	[1..281]	[1..285]
gi\|25291087 - pir\|\|B84123 fructose-1,6-bisphosphate aldolase fbaA [imported] - Bacillus halodurans (strain C-125) gi\|15616348, gi\|... - gi\|15616348\|ref\|NP_244653.1\| fructose-1,6-bisphosphate aldolase [Bacillus halodurans C-125], gi\|1017...	0.0	[1..281]	[1..287]
gi\|41057054, gi\|... - gi\|41057054\|ref\|NP_957657.1\| putative class II fructose-1,6-bisphosphate aldolase [Bacillus methanol...	0.0	[1..281]	[1..284]
ALF_BACSU, ALF1_... - Probable fructose-bisphosphate aldolase OS=Bacillus subtilis GN=fbaA PE=1 SV=2, Probable fructose-bi... gi\|221316001 - gi\|221316001\|ref\|ZP_03597806.1\| fructose-bisphosphate aldolase [Bacillus subtilis subsp. subtilis st... gi\|221320912 - gi\|221320912\|ref\|ZP_03602206.1\| fructose-bisphosphate aldolase [Bacillus subtilis subsp. subtilis st... gi\|221325196 - gi\|221325196\|ref\|ZP_03606490.1\| fructose-bisphosphate aldolase [Bacillus subtilis subsp. subtilis st... ALF_BACSU - Probable fructose-bisphosphate aldolase OS=Bacillus subtilis (strain 168) GN=fbaA PE=1 SV=2	0.0	[1..281]	[1..285]
gi\|77995172, gi\|... - gi\|78043057\|ref\|YP_359000.1\| putative aldolase [Carboxydothermus hydrogenoformans Z-2901], gi\|779951...	0.0	[1..281]	[1..284]
gi\|89211620, gi\|... - gi\|89211620\|ref\|ZP_01189975.1\| Ketose-bisphosphate aldolase, class-II:Fructose-1,6-bisphosphate aldo...	0.0	[1..281]	[1..284]

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Predicted Domain #1

Region A:
Residues: [1-281]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLVQMKDIL MKANQENYGV GAFSVTNMEM VMGAIKAAEE LSSPLILQIA EVRLNHSPIH  60
   61 MIGPLMVAAA KQATVPVAVH FDHGMTFEKI QETLEIGFSS VMFDGSHYPL EENIQKTKEI 120
  121 VELAKQYGAT VEAEIGRVGG SEDGSEDIEM LLTSTTEAKR FAEETDVDAL AVAIGNAHGM 180
  181 YNGDPNLRLD RLQEINDVVH IPLVLHGGSG ISPEDFKQCI QHGVRKINVA TATFQNVITA 240
  241 VNNTVLNTPY SDYFTYHQDV IKAAYENVKS HMQIFGSENR A

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	100.0
Match:	1gvfA
Description:	Tagatose-1,6-bisphosphate aldolase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	3.04075198078553	bayes_pls_golite062009
fructose-bisphosphate aldolase activity	2.06219969438898	bayes_pls_golite062009
transaldolase activity	1.83913207529502	bayes_pls_golite062009
transferase activity, transferring aldehyde or ketonic groups	1.50014841201184	bayes_pls_golite062009
aldehyde-lyase activity	0.85265356790496	bayes_pls_golite062009
lyase activity	0.437176828950096	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: