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View Structure Prediction Details

Protein: gi|30261832, gi|...
Organism: Bacillus anthracis str. Ames
Length: 403 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30261832, gi|....

Description E-value Query
Range
Subject
Range
gi|49328988, gi|... - gi|49477432|ref|YP_036078.1| IS605 family transposase OrfB [Bacillus thuringiensis serovar konkukian...
4.0E-88 [1..403] [1..401]
gi|30257674, gi|... - gi|30263041|ref|NP_845418.1| IS605 family transposase OrfB [Bacillus anthracis str. Ames], gi|302576...
gi|49179809, gi|... - gi|49185882|ref|YP_029134.1| IS605 family transposase OrfB [Bacillus anthracis str. Sterne], gi|4917...
gi|47551825, gi|... - gi|47778120|ref|YP_019733.2| IS605 family transposase OrfB [Bacillus anthracis str. 'Ames Ancestor']...
7.0E-75 [44..403] [1..358]
gi|20516193, gi|... - gi|20807648|ref|NP_622819.1| hypothetical protein TTE1193 [Thermoanaerobacter tengcongensis MB4], gi...
gi|20807648 - gi|20807648|ref|NP_622819.1| hypothetical protein TTE1193 [Thermoanaerobacter tengcongensis MB4]
8.0E-60 [5..372] [64..413]

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Predicted Domain #1
Region A:
Residues: [1-117]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCLIGLRKRQ QKLEQKIEMY ETHIKNGTLP PIIFGGRKNF YERMKDKISN QEWKDLRTRQ  60
   61 LYSRGDKSKK GNLNMRITVD DCGQGWLEIA NSLGRTNGKT KSPRIKVPII IPYRFYH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [118-403]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EITNVVMGEQ IGVNPKGKPI IDHQKYSVEI IRKQNDFYVN ITFDETEIGR VLDFKETPQS  60
   61 DLIAGIDVNP DRIAVSLCTK QGNFKGSKIF YLHNLDTFST NKRTTVIGQI VQQIKKWLIE 120
  121 NNVGGIVLED LKFQQSHDTD KYSNRKFHQF TYKKMLDSLI RMALRNGFSV KTVNPAHTSV 180
  181 IGKLKYCKKF GISVHETAAF TIVRRGLGFQ ERLPKEVVLL LKNKITTKLR IFVASMEESE 240
  241 KDTNTKKVYK KWLQTIKTWK DHHNWKLWSI LHKTVYMSNQ QLLFKI

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.01
Match: 1nmnA
Description: Structure of yqgF from Escherichia coli, a hypothetical protein
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.53924789709051 bayes_pls_golite062009
nuclease activity 1.33447740033502 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 1.23347009562032 bayes_pls_golite062009
hydrolase activity 1.22075366957547 bayes_pls_golite062009
exonuclease activity 1.20458535230258 bayes_pls_golite062009
transposase activity 0.965908684749648 bayes_pls_golite062009
deoxyribonuclease activity 0.330313608754008 bayes_pls_golite062009
ribonuclease activity 0.26323966197813 bayes_pls_golite062009
exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters 0.248165509716873 bayes_pls_golite062009

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