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View Structure Prediction Details

Protein: gi|30260589, gi|...
Organism: Bacillus anthracis str. Ames
Length: 506 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30260589, gi|....

Description E-value Query
Range
Subject
Range
gi|65317852 - gi|65317852|ref|ZP_00390811.1| COG1951: Tartrate dehydratase alpha subunit/Fumarate hydratase class ...
0.0 [1..506] [20..525]
gi|42779619, gi|... - gi|42779619|ref|NP_976866.1| fumarate hydratase, class I [Bacillus cereus ATCC 10987], gi|42735535|g...
0.0 [1..506] [1..506]
gi|49331862, gi|... - gi|49480306|ref|YP_034751.1| fumarate hydratase [Bacillus thuringiensis serovar konkukian str. 97-27...
0.0 [1..506] [1..506]
gi|47556092, gi|... - gi|47567249|ref|ZP_00237963.1| fumarate hydratase, class I, aerobic [Bacillus cereus G9241], gi|4755...
0.0 [1..506] [1..506]
gi|52144825, gi|... - gi|52144825|ref|YP_082006.1| fumarate hydratase [Bacillus cereus E33L], gi|51978294|gb|AAU19844.1| f...
0.0 [1..506] [1..506]
gi|74492436, gi|... - gi|75760086|ref|ZP_00740149.1| Fumarate hydratase [Bacillus thuringiensis serovar israelensis ATCC 3...
gi|228899167, gi... - gi|228899167|ref|ZP_04063437.1| Fumarate hydratase class I, aerobic [Bacillus thuringiensis IBL 4222...
0.0 [1..506] [20..525]
gi|218232931, gi... - gi|218232931|ref|YP_002365266.1| fumarate hydratase, class I [Bacillus cereus B4264], gi|218160888|g...
gi|30018674, gi|... - gi|30018674|ref|NP_830305.1| fumarate hydratase [Bacillus cereus ATCC 14579], gi|29894215|gb|AAP0750...
0.0 [1..506] [1..506]
gi|152022995, gi... - gi|89199953|ref|ZP_01178709.1| Fe-S type hydro-lyases tartrate/fumarate alpha region:Fe-S type hydro...
0.0 [1..506] [20..526]
gi|23105040 - ref|ZP_00091498.1| COG1951: Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-termina...
gi|67086112, gi|... - gi|67156353|ref|ZP_00417946.1| Fe-S type hydro-lyases tartrate/fumarate alpha region:Fe-S type hydro...
0.0 [2..502] [7..503]
gi|77460673, gi|... - gi|77460673|ref|YP_350180.1| fumarase [Pseudomonas fluorescens Pf0-1], gi|77384676|gb|ABA76189.1| pu...
0.0 [2..499] [7..500]

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Predicted Domain #1
Region A:
Residues: [1-97]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKLQESMYQ LIVETSTNLP KDVRRAIQQA KERENAGTRS AMALGTITNN IKMADDNISP  60
   61 ICQDTGMPTF KIYTPVGVNQ LKLKEAIYHA LERATKD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [98-288]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GKLRPNSVDS LFGDNSGNNL GPGTPVIKFE QWEKDYIDAR LILKGGGCEN KNIQYSLPCE  60
   61 LEGLGRAGRD LEGIRKCLLH AVYQAQGQGC SAGVIGVGIG GDRTSGYELA KNQLFRTLDD 120
  121 VNPIPELQQL EEYVLENANK LGIGTMGFGG ETTLLGCKIG VYNRLPASFY VSVAYNCWAY 180
  181 RRLGVTIHPE T

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.439 0.240 fumarate hydratase activity b.60.1 Lipocalins
View Download 0.455 0.194 fumarate hydratase activity a.26.1 4-helical cytokines
View Download 0.551 0.103 fumarate hydratase activity d.122.1 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
View Download 0.521 N/A N/A a.78.1 Fatty acid responsive transcription factor FadR, C-terminal domain
View Download 0.475 N/A N/A d.58.27 Translational regulator protein regA

Predicted Domain #3
Region A:
Residues: [289-506]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GEIMDWLYQE GDDTLQQEAQ EKTEQREIVL QAPITEEQIR KLRVGDVVTI NGMMYTGRDA  60
   61 IHKHLMDNDC PVDLNGQVIY HCGPVVVKDE NDNWQIKAAG PTTSIREEPY QGDIMKKFGI 120
  121 RAVIGKGGMG AKTLAALEEH GGVYLNAIGG AAQYYAECIK EVKDVDFLQF GIPEAMWHLR 180
  181 IEGFKAVVTM DSHGNSLHAD VDKTSLEKLA SFKEPVFK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 61.39794
Match: 2isbA
Description: No description for 2isbA was found.

Predicted functions:

Term Confidence Notes
fumarate hydratase activity 4.07646355358082 bayes_pls_golite062009
catalytic activity 1.02123395223799 bayes_pls_golite062009
hydro-lyase activity 0.556078290190932 bayes_pls_golite062009
carbon-oxygen lyase activity 0.338858403016763 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle