YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30260204, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	295 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30260204, gi|....

Description	E-value	Query Range	Subject Range
PDX1_HEVBR - Probable pyridoxal 5'-phosphate synthase subunit PDX1 OS=Hevea brasiliensis GN=PDX1 PE=2 SV=1	0.0	[2..293]	[17..307]
NbS00025844g0001.1 - protein AED:0.00 eAED:0.00 QI:0\|-1\|0\|1\|-1\|1\|1\|0\|309; (*GB) gi\|46399269\|gb\|AAS92255.1\| (e_value=0.0) ... gi\|46399269, gi\|... - gi\|46399271\|gb\|AAS92256.1\| putative pyridoxine biosynthesis protein isoform B [Nicotiana tabacum], g...	0.0	[2..293]	[18..307]
PDXS_HERA2 - Pyridoxal 5'-phosphate synthase subunit PdxS OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 7...	0.0	[4..295]	[2..293]
PDX13_ARATH - Pyridoxal 5'-phosphate synthase subunit PDX1.3 OS=Arabidopsis thaliana GN=PDX13 PE=1 SV=2	0.0	[2..293]	[17..307]
gi\|72256517 - gi\|72256517\|gb\|AAZ67141.1\| pyridoxine biosynthesis protein [Lotus corniculatus var. japonicus]	0.0	[2..293]	[18..308]
gi\|92870196, gi\|... - gi\|92870196\|gb\|ABE79531.1\| Vitamin B6 biosynthesis protein [Medicago truncatula], gi\|72256515\|gb\|AAZ...	0.0	[7..293]	[27..312]
PDXS_CHLAA - Pyridoxal 5'-phosphate synthase subunit PdxS OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 63... gi\|53797482 - ref\|ZP_00358278.1\| COG0214: Pyridoxine biosynthesis enzyme [Chloroflexus aurantiacus] PDXS_CHLSY - Pyridoxal 5'-phosphate synthase subunit PdxS OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 63...	0.0	[4..295]	[2..293]
PDX1_PHAVU - Pyridoxal 5'-phosphate synthase subunit PDX1 OS=Phaseolus vulgaris GN=PDX1 PE=2 SV=1	0.0	[2..293]	[20..310]
gi\|83588883, gi\|... - gi\|83588883\|ref\|YP_428892.1\| pyridoxal biosynthesis lyase PdxS [Moorella thermoacetica ATCC 39073], ...	0.0	[6..295]	[7..296]

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Predicted Domain #1

Region A:
Residues: [1-295]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNVTGTERV KRGMAEMQKG GVIMDVINAE QAKIAEEAGA VAIMALERVP ADIRAAGGVS  60
   61 RMADPTIVEE VMGAVSIPVM AKCRIGHLVE ARVLESLGVD YIDESEVLTP ADEVYHLNKR 120
  121 DYTVPFVCGC RDIGEAARRI AEGASMLRTK GEPGTGNIVE AVRHMRQVNA EIRQVASLRE 180
  181 DELMTYAKNT GAPYEVLLEI KRLGRLPVVN FAAGGVATPA DAALMMQLGA DGVFVGSGIF 240
  241 KSENPAKFAR AIVEATTHYE DYELIASLSK GLGNAMKGIE ISTLLPEQRM QERGW

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	117.0
Match:	2nv2A
Description:	No description for 2nv2A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits