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View Structure Prediction Details

Protein: gi|46196862, gi|...
Organism: Thermus thermophilus HB27
Length: 158 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|46196862, gi|....

Description E-value Query
Range
Subject
Range
gi|55772682, gi|... - gi|55981269|ref|YP_144566.1| bacterioferritin comigratory protein, thiol peroxidase, putative [Therm...
178.0 [0..1] [158..1]

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Predicted Domain #1
Region A:
Residues: [1-158]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPAMEVGTLA PDFALPDQEG RTHRLSDYRG RWVVLYFYPK DDTPGCTKEA CGFRDQMGSL  60
   61 KALDAVVLGV SADDVESHKR FAEKYGLNFP LLADPERKVI GAYGAWGKKN LYGKEVEGVL 120
  121 RQTFLIDPEG RIARVWRKVS PEGHALEVAE ALKALRGA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 38.154902
Match: 1qmvA
Description: Thioredoxin peroxidase 2 (thioredoxin peroxidase B, 2-cys peroxiredoxin)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
antioxidant activity 3.66884588063322 bayes_pls_golite062009
peroxidase activity 3.43831566988273 bayes_pls_golite062009
oxidoreductase activity, acting on peroxide as acceptor 3.43831566988273 bayes_pls_golite062009
glutathione peroxidase activity 2.56524997297011 bayes_pls_golite062009
peroxiredoxin activity 2.12777217096121 bayes_pls_golite062009
thioredoxin peroxidase activity 1.96134566495756 bayes_pls_golite062009
oxidoreductase activity, acting on sulfur group of donors 1.8187537496904 bayes_pls_golite062009
protein disulfide oxidoreductase activity 1.47769936616412 bayes_pls_golite062009
disulfide oxidoreductase activity 1.32811008894503 bayes_pls_golite062009
binding 1.25802922431343 bayes_pls_golite062009
selenium binding 1.1082524159827 bayes_pls_golite062009
catalytic activity 0.672192331361968 bayes_pls_golite062009
transcription regulator activity 0.52671047749426 bayes_pls_golite062009
protein binding 0.134341907247724 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle