| Protein: | gi|39984377, gi|... |
| Organism: | Geobacter sulfurreducens PCA |
| Length: | 296 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|39984377, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
180.0 | [0..3] | [291..823] |
|
|
177.0 | [0..3] | [291..1341] |
|
Region A: Residues: [1-69] |
1 11 21 31 41 51
| | | | | |
1 MSATISPATG KAYGVQRVCL AWGVPRSSFY SRAGRKTLPA VLLKRGPKTP LSDDEVLSLI 60
61 RTDLETSPF
|
| Detection Method: |  |
| Confidence: | 7.522879 |
| Match: | 1hrhA |
| Description: | HIV RNase H (Domain of reverse transcriptase) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [70-296] |
1 11 21 31 41 51
| | | | | |
1 VGEGHRKVWG RLRFVKGIKV GRKRVLRLMR ENNLLSPHRV VQGQPKDHAG KIITAAPNVM 60
61 WGTDGTKIFT LEEGWCWLFT AVEHWNAECV GWHVTKNGDR FAALQPLAMG IKARFGSVGA 120
121 AAARGLALRM DHGSQYLSEH FQNQIKFWGI APSFSFVAEP QTNGVTERFN RTIKEQVIYG 180
181 RHYRTIEEVR MAVADFMDRY NRLWLVEKLG FRSPRQAFEE YQLKKAA
|
| Detection Method: | |
| Confidence: | 28.0 |
| Match: | 1k6yA |
| Description: | N-terminal Zn binding domain of HIV integrase; Retroviral integrase, catalytic domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| nuclease activity | 1.81796593394339 | bayes_pls_golite062009 |
| exonuclease activity | 1.64964907710028 | bayes_pls_golite062009 |
| catalytic activity | 1.62277843225829 | bayes_pls_golite062009 |
| hydrolase activity, acting on ester bonds | 1.58702937619673 | bayes_pls_golite062009 |
| hydrolase activity | 1.41857676124086 | bayes_pls_golite062009 |
| transposase activity | 1.09803761537443 | bayes_pls_golite062009 |
| ribonuclease activity | 0.71352601607444 | bayes_pls_golite062009 |
| deoxyribonuclease activity | 0.63299586096139 | bayes_pls_golite062009 |
| exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | 0.62821439153618 | bayes_pls_golite062009 |
| endonuclease activity | 0.150927275899469 | bayes_pls_golite062009 |
