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View Structure Prediction Details

Protein: gi|39984296, gi|...
Organism: Geobacter sulfurreducens PCA
Length: 211 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|39984296, gi|....

Description E-value Query
Range
Subject
Range
gi|255055897, gi... - gi|255055897|ref|ZP_05308122.1| Carbonate dehydratase [Pectobacterium wasabiae WPP163], gi|254988268...
gi|50122249, gi|... - gi|50122249|ref|YP_051416.1| carbonic anhydrase [Pectobacterium atrosepticum SCRI1043], gi|49612775|...
256.0 [0..1] [211..1]
gi|71839849, gi|... - gi|71839849|ref|ZP_00679589.1| Carbonate dehydratase [Pelobacter propionicus DSM 2379], gi|71739701|...
254.0 [0..1] [210..1]
gi|62178741, gi|... - gi|62178741|ref|YP_215158.1| putative carbonic anhydrase [Salmonella enterica subsp. enterica serova...
gi|205347482, gi... - gi|205360728|ref|ZP_02685949.2| carbonate dehydratase [Salmonella enterica subsp. enterica serovar H...
253.0 [0..1] [210..18]
gi|113889061, gi... - gi|78690890|ref|ZP_00855526.1| Carbonate dehydratase [Shewanella sp. MR-7], gi|78509731|gb|EAP23117....
253.0 [0..1] [209..1]
gi|82404653, gi|... - gi|82497288|ref|ZP_00882844.1| Carbonate dehydratase [Shewanella sp. MR-4], gi|82404653|gb|EAP45337....
253.0 [0..1] [209..1]
gi|75854184, gi|... - gi|75854184|ref|ZP_00761894.1| COG0288: Carbonic anhydrase [Vibrio sp. Ex25], gi|254230326|ref|ZP_04...
gi|91187816, gi|... - gi|91228633|ref|ZP_01262550.1| putative carbonic anhydrase [Vibrio alginolyticus 12G01], gi|91187816...
252.0 [0..1] [210..1]
gi|54310267, gi|... - gi|54310267|ref|YP_131287.1| putative carbonic anhydrase [Photobacterium profundum SS9], gi|46914708...
252.0 [0..1] [210..1]
gi|81239563, gi|... - gi|82775415|ref|YP_401762.1| carbonic anhydrase [Shigella dysenteriae Sd197], gi|81239563|gb|ABB6027...
252.0 [0..1] [211..1]
gi|124547212, gi... - gi|124547212|ref|ZP_01706159.1| carbonic anhydrase [Shewanella putrefaciens 200], gi|124509364|gb|EA...
gi|120558793, gi... - gi|82743458|ref|ZP_00906103.1| Carbonate dehydratase [Shewanella sp. W3-18-1], gi|82719181|gb|EAP541...
gi|77815085, gi|... - gi|77815085|ref|ZP_00814328.1| Carbonate dehydratase [Shewanella putrefaciens CN-32], gi|77809949|gb...
251.0 [0..1] [210..1]
gi|194448935, gi... - gi|194448935|ref|YP_002044148.1| carbonic anhydrase [Salmonella enterica subsp. enterica serovar Hei...
gi|238911231 - gi|238911231|ref|ZP_04655068.1| carbonic anhydrase [Salmonella enterica subsp. enterica serovar Tenn...
gi|197215082, gi... - gi|197251379|ref|YP_002145170.1| carbonate dehydratase [Salmonella enterica subsp. enterica serovar ...
gi|195632738, gi... - gi|195632738|gb|EDX51192.1| carbonate dehydratase [Salmonella enterica subsp. enterica serovar Newpo...
gi|194445260, gi... - gi|194445260|ref|YP_002039406.1| carbonate dehydratase [Salmonella enterica subsp. enterica serovar ...
gi|168230463, gi... - gi|205335031|gb|EDZ21795.1| carbonate dehydratase [Salmonella enterica subsp. enterica serovar Kentu...
lcl|NC_016856.1_... - [gene=yadF] [protein=carbonic anhydrase] [protein_id=YP_005235834.1] [location=complement(202115..20...
gi|205337446, gi... - gi|205337446|gb|EDZ24210.1| carbonate dehydratase [Salmonella enterica subsp. enterica serovar Heide...
gi|167550631, gi... - gi|205324392|gb|EDZ12231.1| carbonate dehydratase [Salmonella enterica subsp. enterica serovar Saint...
gi|167990050, gi... - gi|205331331|gb|EDZ18095.1| carbonate dehydratase [Salmonella enterica subsp. enterica serovar 4,[5]...
gi|16763561, gi|... - gi|16763561|ref|NP_459176.1| carbonic anhydrase [Salmonella typhimurium LT2], gi|16418673|gb|AAL1913...
gi|162139620 - gi|162139620|ref|YP_215158.2| carbonic anhydrase [Salmonella enterica subsp. enterica serovar Choler...
gi|206707490, gi... - gi|207855687|ref|YP_002242338.1| carbonic anhydrase [Salmonella enterica subsp. enterica serovar Ent...
gi|213053559 - gi|213053559|ref|ZP_03346437.1| carbonic anhydrase [Salmonella enterica subsp. enterica serovar Typh...
gi|200389129, gi... - gi|200389129|ref|ZP_03215741.1| carbonate dehydratase [Salmonella enterica subsp. enterica serovar V...
gi|205351512, gi... - gi|205351512|ref|YP_002225313.1| carbonic anhydrase [Salmonella enterica subsp. enterica serovar Gal...
gi|197240280, gi... - gi|197262025|ref|ZP_03162099.1| carbonate dehydratase [Salmonella enterica subsp. enterica serovar S...
gi|198245647, gi... - gi|198245647|ref|YP_002214127.1| carbonate dehydratase [Salmonella enterica subsp. enterica serovar ...
251.0 [0..1] [210..1]

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Predicted Domain #1
Region A:
Residues: [1-211]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKDIERFIAG FRRFREDYFG SEYSPFEHLK QGQSPKTMII GCSDSRVDPA ILTDCAPGDI  60
   61 FTVRNVANLV PPFEENGGLH GVSAALEFAV CHLGVEHIIV LGHSQCGGIN ALMKGTCGCK 120
  121 GGGFISRWMS IATPARERVL AELPEKDTAL QQRAAEQAAI LLSLENLHSF PWIDERVVRG 180
  181 ELTLHGWYFD ISAGELLEYR SETGLFEKVS K

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 64.39794
Match: 1ekjA
Description: beta-carbonic anhydrase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
carbonate dehydratase activity 2.96380803089124 bayes_pls_golite062009
catalytic activity 1.85658156053797 bayes_pls_golite062009
carbon-oxygen lyase activity 1.691366175135 bayes_pls_golite062009
hydro-lyase activity 1.65497918079842 bayes_pls_golite062009
lyase activity 1.62374861994341 bayes_pls_golite062009
binding 1.32962036184517 bayes_pls_golite062009
protein binding 0.132818074687599 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle