YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|39982741, gi\|...
Organism:	Geobacter sulfurreducens PCA
Length:	137 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|39982741, gi|....

Description	E-value	Query Range	Subject Range
gi\|22298621, gi\|... - gi\|22298621\|ref\|NP_681868.1\| adenine glycosylase [Thermosynechococcus elongatus BP-1], gi\|22294801\|d...	130.0	[0..2]	[128..237]
gi\|75701836, gi\|... - gi\|75908111\|ref\|YP_322407.1\| Mutator MutT [Anabaena variabilis ATCC 29413], gi\|75701836\|gb\|ABA21512....	128.0	[0..2]	[127..9]
gi\|83757907, gi\|... - gi\|83816513\|ref\|YP_446225.1\| A/G-specific adenine glycosylase [Salinibacter ruber DSM 13855], gi\|837...	126.0	[0..2]	[132..220]
gi\|53762849, gi\|... - gi\|81299484\|ref\|YP_399692.1\| A/G-specific DNA-adenine glycosylase [Synechococcus elongatus PCC 7942]... gi\|56750865, gi\|... - gi\|56750865\|ref\|YP_171566.1\| mutator MutT protein [Synechococcus elongatus PCC 6301], gi\|56685824\|db...	125.0	[0..2]	[127..231]
gi\|7443910 - pir\|\|S74508 mutator protein mutT - Synechocystis sp. (strain PCC 6803) gi\|16329252, gi\|... - gi\|1651732\|dbj\|BAA16660.1\| mutator MutT protein [Synechocystis sp. PCC 6803], gi\|16329252\|ref\|NP_439...	123.0	[0..2]	[129..7]
gi\|23127709, gi\|... - gi\|23127709\|ref\|ZP_00109572.1\| COG0494: NTP pyrophosphohydrolases including oxidative damage repair ...	122.0	[0..2]	[125..10]
gi\|125973998, gi... - gi\|67917019\|ref\|ZP_00510699.1\| NUDIX hydrolase [Clostridium thermocellum ATCC 27405], gi\|67849034\|gb... gi\|196251427, gi... - gi\|196251427\|ref\|ZP_03150096.1\| NUDIX hydrolase [Clostridium thermocellum DSM 4150], gi\|196199039\|gb...	119.0	[0..1]	[128..1]
gi\|33238768, gi\|... - gi\|33241238\|ref\|NP_876180.1\| A/G-specific DNA glycosylase [Prochlorococcus marinus subsp. marinus st...	119.0	[0..4]	[129..266]
gi\|78168021, gi\|... - gi\|78183727\|ref\|YP_376161.1\| Mutator MutT [Synechococcus sp. CC9902], gi\|78168021\|gb\|ABB25118.1\| A/G...	118.0	[0..2]	[136..212]
gi\|84667594, gi\|... - gi\|84684615\|ref\|ZP_01012516.1\| mutator mutT protein [Rhodobacterales bacterium HTCC2654], gi\|8466759...	118.0	[0..5]	[129..6]

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Predicted Domain #1

Region A:
Residues: [1-137]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYPLLVTAAI IEHNGLILLT RRKPDAPYPL LWEFPGGKVE PEEHPEACIV REVLEELAME  60
   61 VAVEGIYDVI YYRYPERAVI VLAYRCTWTG GELQERDVAG HRWVAPAEVP AFDLLPADIP 120
  121 LAARIAREFG NAGSSRL

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	22.69897
Match:	1mutA
Description:	NMR STUDY OF MUTT ENZYME, A NUCLEOSIDE TRIPHOSPHATE PYROPHOSPHOHYDROLASE
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	1.86119802438676	bayes_pls_golite062009
hydrolase activity	0.97790691270817	bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	0.544115189438	bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides	0.54377405132398	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: