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View Structure Prediction Details

Protein: gi|34483714
Organism: Wolinella succinogenes
Length: 178 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|34483714.

Description E-value Query
Range
Subject
Range
gi|93354089, gi|... - gi|94310237|ref|YP_583447.1| HyaD peptidase [Ralstonia metallidurans CH34], gi|93354089|gb|ABF08178....
184.0 [0..2] [176..20]

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Predicted Domain #1
Region A:
Residues: [1-178]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKILVLGIGN ILFGDEGIGV HLSNLLKVNY RFEGPHQVDV IDGGTLAQLL IPLITSYDYV  60
   61 IVIDCVDAGG GKIGEVYFFD FDNVPNVITW QGSAHEVEML QTLRMTEVNG DLPPVKIVGV 120
  121 IPSIIGSETA FDLSKEVAEA SVTMEKIVLN HLQELGVEIT RIDSKTIDEI APLSYKGF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 40.69897
Match: 1cfzA
Description: Hydrogenase maturating endopeptidase HybD
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.11092890710142 bayes_pls_golite062009
peptidase activity 0.52936925148529 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle