| Protein: | PIE1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 2055 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PIE1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
1459.0 | [0..1] | [2055..1] |
|
Region A: Residues: [1-363] |
1 11 21 31 41 51
| | | | | |
1 MASKGGKSKP DIVMASKSGK SKPDNESRAK RQKTLEAPKE PRRPKTHWDH VLEEMAWLSK 60
61 DFESERKWKL AQAKKVALRA SKGMLDQASR EERKLKEEEQ RLRKVALNIS KDMKKFWMKV 120
121 EKLVLYKHQL VRNEKKKKAM DKQLEFLLGQ TERYSTMLAE NLVEPYKQGQ NTPSKPLLTI 180
181 ESKSDEERAE QIPPEINSSA GLESGSPELD EDYDLKSEDE TEDDEDTIEE DEKHFTKRER 240
241 QEELEALQNE VDLPVEELLR RYTSGRVSRE TSPVKDENED NLTSVSRVTS PVKDENQDNL 300
301 ASVGQDHGED KNNLAASEET EGNPSVRRSN DSYGHLAISE THSHDLEPGM TTASVKSRKE 360
361 DHT
|
| Detection Method: |  |
| Confidence: | 19.39794 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [364-503] |
1 11 21 31 41 51
| | | | | |
1 YDFNDEQEDV DFVLANGEEK DDEATLAVEE ELAKADNEDH VEEIALLQKE SEMPIEVLLA 60
61 RYKEDFGGKD ISEDESESSF AVSEDSIVDS DENRQQADLD DDNVDLTECK LDPEPCSENV 120
121 EGTFHEVAED NDKDSSDKIA
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [504-777] |
1 11 21 31 41 51
| | | | | |
1 DAAAAARSAQ PTGFTYSTTK VRTKLPFLLK HSLREYQHIG LDWLVTMYEK KLNGILADEM 60
61 GLGKTIMTIA LLAHLACDKG IWGPHLIVVP TSVMLNWETE FLKWCPAFKI LTYFGSAKER 120
121 KLKRQGWMKL NSFHVCITTY RLVIQDSKMF KRKKWKYLIL DEAHLIKNWK SQRWQTLLNF 180
181 NSKRRILLTG TPLQNDLMEL WSLMHFLMPH VFQSHQEFKD WFCNPIAGMV EGQEKINKEV 240
241 IDRLHNVLRP FLLRRLKRDV EKQLPSKHEH VIFC
|
| Detection Method: | |
| Confidence: | 88.09691 |
| Match: | 1z63A |
| Description: | Sulfolobus solfataricus SWI2/SNF2 ATPase core in complex with dsDNA |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [778-993] |
1 11 21 31 41 51
| | | | | |
1 RLSKRQRNLY EDFIASTETQ ATLTSGSFFG MISIIMQLRK VCNHPDLFEG RPIVSSFDMA 60
61 GIDVQLSSTI CSLLLESPFS KVDLEALGFL FTHLDFSMTS WEGDEIKAIS TPSELIKQRV 120
121 NLKDDLEAIP LSPKNRKNLQ GTNIFEEIRK AVFEERIQES KDRAAAIAWW NSLRCQRKPT 180
181 YSTSLRTLLT IKGPLDDLKA NCSSYMYSSI LADIVL
|
| Detection Method: | |
| Confidence: | 5.08 |
| Match: | 1z5zA |
| Description: | Sulfolobus solfataricus SWI2/SNF2 ATPase C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [994-1254] |
1 11 21 31 41 51
| | | | | |
1 SPIERFQKMI ELVEAFTFAI PAARVPSPTC WCSKSDSPVF LSPSYKEKVT DLLSPLLSPI 60
61 RPAIVRRQVY FPDRRLIQFD CGKLQELAML LRKLKFGGHR ALIFTQMTKM LDVLEAFINL 120
121 YGYTYMRLDG STPPEERQTL MQRFNTNPKI FLFILSTRSG GVGINLVGAD TVIFYDSDWN 180
181 PAMDQQAQDR CHRIGQTREV HIYRLISEST IEENILKKAN QKRVLDNLVI QNGEYNTEFF 240
241 KKLDPMELFS GHKALTTKDE K
|
| Detection Method: | |
| Confidence: | 25.69897 |
| Match: | 1z5zA |
| Description: | Sulfolobus solfataricus SWI2/SNF2 ATPase C-terminal domain |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1255-1327] |
1 11 21 31 41 51
| | | | | |
1 ETSKHCGADI PLSNADVEAA LKQAEDEADY MALKRVEQEE AVDNQEFTEE PVERPEDDEL 60
61 VNEDDIKADE PAD
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [1328-1441] |
1 11 21 31 41 51
| | | | | |
1 QGLVAAGPAK EEMSLLHSDI RDERAVITTS SQEDDTDVLD DVKQMAAAAA DAGQAISSFE 60
61 NQLRPIDRYA IRFLELWDPI IVEAAMENEA GFEEKEWELD HIEKYKEEME AEID
|
| Detection Method: | |
| Confidence: | 7.221849 |
| Match: | 1ofcX |
| Description: | nucleosome recognition module of ISWI ATPase |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1442-1635] |
1 11 21 31 41 51
| | | | | |
1 DGEEPLVYEK WDADFATEAY RQQVEVLAQH QLMEDLENEA REREAAEVAE MVLTQNESAH 60
61 VLKPKKKKKA KKAKYKSLKK GSLAAESKHV KSVVKIEDST DDDNEEFGYV SSSDSDMVTP 120
121 LSRMHMKGKK RDLIVDTDEE KTSKKKAKKH KKSLPNSDIK YKQTSALLDE LEPSKPSDSM 180
181 VVDNELKLTN RGKT
|
| Detection Method: | |
| Confidence: | 4.69897 |
| Match: | 2dfsA |
| Description: | No description for 2dfsA was found. |
|
Region A: Residues: [1636-1663] |
1 11 21 31 41 51
| | | | | |
1 VGKKFITSMP IKRVLMIKPE KLKKGNLW
|
| Detection Method: | |
| Confidence: | 5.522879 |
| Match: | 2i1jA |
| Description: | No description for 2i1jA was found. |
|
Region A: Residues: [1664-1867] |
1 11 21 31 41 51
| | | | | |
1 SRDCVPSPDS WLPQEDAILC AMVHEYGPNW NFVSGTLYGM TAGGAYRGRY RHPAYCCERY 60
61 RELIQRHILS ASDSAVNEKN LNTGSGKALL KVTEENIRTL LNVAAEQPDT EMLLQKHFSC 120
121 LLSSIWRTST RTGNDQMLSL NSPIFNRQFM GSVNHTQDLA RKPWQGMKVT SLSRKLLESA 180
181 LQDSGPSQPD NTISRSRLQE TQPI
|
| Detection Method: | |
| Confidence: | 2.44 |
| Match: | 1a5jA |
| Description: | CHICKEN B-MYB DNA BINDING DOMAIN, REPEAT 2 AND REPEAT3, NMR, 32 STRUCTURES |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.232528774113254 | bayes_pls_golite062009 |
|
Region A: Residues: [1868-2055] |
1 11 21 31 41 51
| | | | | |
1 NKLGLELTLE FPRGNDDSLN QFPPMISLSI DGSDSLNYVN EPPGEDVLKG SRVAAENRYR 60
61 NAANACIEDS FGWASNTFPA NDLKSRTGTK AQSLGKHKLS ASDSAKSTKS KHRKLLAEQL 120
121 EGAWVRPNDP NLKFDFTPGD REEEEEQEVD EKANSAEIEM ISCSQWYDPF FTSGLDDCSL 180
181 ASDISEIE
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
