Protein: | TRB1_ARATH |
Organism: | Arabidopsis thaliana |
Length: | 300 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TRB1_ARATH.
Description | E-value | Query Range |
Subject Range |
|
177.0 | [0..1] | [300..1] |
Region A: Residues: [1-183] |
1 11 21 31 41 51 | | | | | | 1 MGAPKQKWTQ EEESALKSGV IKHGPGKWRT ILKDPEFSGV LYLRSNVDLK DKWRNMSVMA 60 61 NGWGSREKSR LAVKRTFSLP KQEENSLALT NSLQSDEENV DATSGLQVSS NPPPRRPNVR 120 121 LDSLIMEAIA TLKEPGGCNK TTIGAYIEDQ YHAPPDFKRL LSTKLKYLTS CGKLVKVKRK 180 181 YRI |
Detection Method: | |
Confidence: | 25.69897 |
Match: | 1h88C |
Description: | c-Myb, DNA-binding domain |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
binding | 0.334577365229545 | bayes_pls_golite062009 |
transcription regulator activity | 0.0696342306231097 | bayes_pls_golite062009 |
Region A: Residues: [184-300] |
1 11 21 31 41 51 | | | | | | 1 PNSTPLSSHR RKGLGVFGGK QRTSSLPSPK TDIDEVNFQT RSQIDTEIAR MKSMNVHEAA 60 61 AVAAQAVAEA EAAMAEAEEA AKEAEAAEAE AEAAQAFAEE ASKTLKGRNI CKMMIRA |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.